Pharmacogenomics
How your genes affect medication metabolism and response
This category covers genetic variants in drug metabolism enzymes (CYP2D6, CYP2C19, CYP2C9, CYP1A2), drug transporters (SLCO1B1), and other variants that influence how the body processes common medications. These variants affect the speed at which drugs are activated, metabolized, or cleared.
Genetic Variants (26)
rs3892097
(CYP2D6 *4)Major enzyme for metabolizing ~25% of medications including opioids, antidepressants, and beta-blockers
rs1065852
(CYP2D6 *10)Decreased function CYP2D6 variant common in Asian populations
rs4244285
(CYP2C19 *2)No-function CYP2C19 variant affecting PPIs, clopidogrel, and some antidepressants
rs12248560
(CYP2C19 *17)Increased function CYP2C19 variant - rapid/ultrarapid metabolizer
rs1799853
(CYP2C9 *2)Decreased function variant affecting warfarin, phenytoin, and NSAIDs
rs1057910
(CYP2C9 *3)No-function CYP2C9 variant with major warfarin implications
rs762551
(CYP1A2 *1F)Caffeine metabolism - affects how quickly you process caffeine
rs4149056
(SLCO1B1 *5)Statin transport - affects muscle side effect risk with statins
rs9923231
(VKORC1 -1639G>A)Warfarin sensitivity - determines initial dosing
rs6025
(F5 Leiden)Factor V Leiden - blood clotting disorder affecting thrombosis risk
rs671
(ALDH2 *2)Alcohol metabolism - flush reaction and cancer risk
rs16947
(CYP2D6 *2)Common CYP2D6 variant defining the *2 allele; previously considered normal-function but recent evidence shows reduced expression through altered splicing
rs5030655
(CYP2D6 *6)Frameshift deletion causing no enzyme function, defining poor metabolizer status for many drugs including codeine, tramadol, and antidepressants
rs28371725
(CYP2D6 *41)Intronic splice variant causing decreased CYP2D6 enzyme activity through aberrant splicing
rs776746
(CYP3A5 *3)Splice site variant creating a non-functional CYP3A5 enzyme, dramatically affecting metabolism of tacrolimus and other immunosuppressants
rs3745274
(CYP2B6 516G>T)Decreased-function variant affecting metabolism of efavirenz, methadone, bupropion, and cyclophosphamide
rs3918290
(DPYD *2A)Most critical pharmacogenomic variant causing complete loss of DPD enzyme function; increases fatal 5-FU/capecitabine toxicity risk 25-fold without dose reduction
rs67376798
(DPYD D949V)Decreased-function variant reducing DPD enzyme activity ~30%, requiring 50% fluoropyrimidine dose reduction
rs1142345
(TPMT *3C)No-function variant causing deficient thiopurine methylation; most common TPMT deficiency allele in East Asian and African populations
rs2231142
(ABCG2 Q141K)Reduces ABCG2 transporter function affecting rosuvastatin levels and uric acid excretion, increasing risk for statin side effects and gout
rs2108622
(CYP4F2 V433M (*3))Reduces vitamin K metabolism, requiring higher warfarin doses to achieve anticoagulation
rs1799971
(OPRM1 A118G)Mu-opioid receptor variant affecting opioid response, pain sensitivity, and potentially naltrexone efficacy
rs1045642
(ABCB1 C3435T)Synonymous variant in P-glycoprotein affecting drug efflux pump expression and hundreds of substrate drugs
rs4148323
(UGT1A1 *6 Gly71Arg)Phase II glucuronidation enzyme that metabolizes bilirubin and many drugs including irinotecan; reduced activity causes Gilbert syndrome and severe chemotherapy toxicity
rs2740574
(CYP3A4 *1B -392A>G)Promoter variant affecting CYP3A4 expression, most common in African populations
rs116855232
(NUDT15 Arg139Cys)Nucleotide diphosphatase that inactivates toxic thiopurine metabolites; reduced function causes severe myelosuppression at standard drug doses