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rs2515641 — CYP2E1
Chromosome 10 Risk Allele T Category Pharmacogenomics Drug Metabolism, Pharmacogenomics, Liver Health, Alcohol, Environmental Toxins

Synonymous exon-8 variant that reduces CYP2E1 mRNA and protein expression, altering metabolism of acetaminophen, isoniazid, ethanol, and volatile anesthetics

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rs3787345 — PTPN1 PTPN1 LD Block Co-Variant
Chromosome 20 Risk Allele C Category Blood Sugar & Diabetes Insulin Resistance, Diabetes, LDL Cholesterol, Metabolic Health, Insulin, Cardiovascular

Intronic PTPN1 tag SNP within the 100-kb PTP1B insulin-resistance haplotype block; the minor C allele co-segregates with the risk haplotype associated with elevated PTP1B expression and impaired insulin signaling

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rs4946935 — FOXO3
Chromosome 6 Risk Allele G Category Longevity & Aging Longevity, Aging, Oxidative Stress, Inflammation, Cardiovascular, Ovarian Reserve, Menopause

Functionally validated FOXO3 intronic variant that creates an SRF binding site on the longevity allele, driving IGF-1-reversible enhancer activity and higher FOXO3 expression

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rs516134 — RGS16 RGS16 chronotype variant
Chromosome 1 Risk Allele C Category Hormones & Sleep Chronotype, Circadian, Sleep, Hormones, Brain Health

Regulatory variant ~20 kb downstream of RGS16 that influences circadian chronotype; the C allele is associated with morningness preference (OR 1.21) in the largest replicated chronotype GWAS

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rs7664413 — VEGFC
Chromosome 4 Risk Allele T Category Innate Immunity & Infection Defense Lymphatic, Lipedema, Fat Metabolism, Cardiovascular, Inflammation, Women's Health

Intronic variant in the primary lymphangiogenesis growth factor gene associated with elevated lymphedema risk and impaired lymphatic vascular support

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rs1906252 — POU3F2
Chromosome 6 Risk Allele A Category Neurology & Cognition Brain Health, Neurological Risk, Cognition, Neuroplasticity, Memory

Regulatory variant at chromosome 6q16.1 near POU3F2 (BRN2), a master transcription factor for cortical neuron development; the A allele is associated with higher general cognitive ability and educational attainment in GWAS studies totalling over 1 million individuals

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rs20541 — IL13 R130Q
Chromosome 5 Risk Allele A Category Allergy & Atopic Disease Asthma, Inflammation, Autoimmune, Skin Health, Biologic Therapy, T-Cell Regulation

Missense variant in IL-13 that enhances Th2 cytokine signaling, elevating serum IgE and increasing risk for atopic dermatitis, allergic rhinitis, and eczema; the minor A allele (Q130) confers risk while the common G allele (R130) is protective for atopic disease

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rs2236225 — MTHFD1 G1958A
Chromosome 14 Risk Allele A Category Methylation & Detox Methylation, Folate, B Vitamins, Diet

Folate processing enzyme — reduced stability increases choline need

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rs2740574 — CYP3A4 *1B -392A>G
Chromosome 7 Risk Allele C Category Pharmacogenomics Drug Metabolism, Pharmacogenomics, Cancer Risk, Ancestry

Promoter variant affecting CYP3A4 expression, most common in African populations

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rs3787348 — PTPN1 PTPN1 intronic variant
Chromosome 20 Risk Allele T Category Blood Sugar & Diabetes Insulin Resistance, Leptin, Obesity, Diabetes, Metabolic Health, Fat Distribution

Intronic PTPN1 tag SNP within the 100-kb insulin-resistance haplotype block; carriers of the T allele show reduced weight loss response to lifestyle intervention and blunted leptin reduction

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