Research

rs104894502 — TPM1 E180G

Rare pathogenic missense variant in cardiac alpha-tropomyosin causing familial hypertrophic cardiomyopathy through increased calcium sensitivity and impaired muscle relaxation

Established Pathogenic Share

Details

Gene
TPM1
Chromosome
15
Risk allele
G
Clinical
Pathogenic
Evidence
Established

Population Frequency

AA
100%
AG
0%
GG
0%

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TPM1 E180G — When the Heart's Safety Catch Breaks

Your heart contracts and relaxes roughly 100,000 times a day. Each cycle depends on a molecular off-switch: a protein called tropomyosin11 tropomyosin
Tropomyosin is a long, rod-shaped protein that wraps around actin filaments in muscle cells. At rest it physically blocks the sites where myosin (the motor protein) can grab actin, preventing contraction until calcium signals it to step aside
that sits like a lid on actin filaments, blocking the cardiac motor machinery until calcium says "go." The TPM1 E180G variant — a single amino-acid substitution replacing glutamic acid with glycine at position 180 of cardiac alpha-tropomyosin — weakens that lid. The result is a heart that can't fully disengage its own throttle, pushing toward hypertrophic cardiomyopathy (HCM): progressive thickening of the left ventricular wall that stiffens the pump and, in some carriers, triggers dangerous arrhythmias.

E180G was first identified in the landmark 1994 Cell paper by Thierfelder and colleagues22 landmark 1994 Cell paper by Thierfelder and colleagues
Thierfelder L et al., Cell 77:701–712, 1994 — the paper that established familial HCM as "a disease of the sarcomere" by showing mutations in multiple distinct sarcomeric proteins produce the same cardiac phenotype
, which catalogued the first alpha-tropomyosin mutations causing familial HCM on chromosome 15q2. It is classified as ClinVar Pathogenic (VCV000012455), supported by multiple independent submitters without conflicts, and listed as the first allelic variant in OMIM entry 191010.

The Mechanism

Normally, tropomyosin exists in a tightly coiled double-helix that shifts between three positions — blocked, closed, and open — depending on calcium levels. The Glu180Gly substitution removes a charged glutamic acid residue and replaces it with tiny glycine, which has almost no side chain. This dramatically increases the local and global flexibility33 local and global flexibility
Measured as persistence length — a quantitative index of a polymer's resistance to bending. Wild-type tropomyosin has a persistence length of approximately 150 nm; E180G reduces this, making the filament more prone to curving and bending
of the tropomyosin filament by approximately 35% compared to wild-type protein.

The consequence is mechanical: excess flexibility impedes normal propagation of the "blocked → open" activation signal along the thin filament, and requires a smaller calcium signal to trigger contraction. Atomic force microscopy44 Atomic force microscopy
A technique that traces the physical contour of a single protein molecule along a surface, allowing direct measurement of bending at nanometer scale
and molecular dynamics simulations55 molecular dynamics simulations
Computer models that simulate how individual atoms in a protein move over time, revealing conformational changes too fast to observe experimentally
both confirm this increased flexibility, which destabilizes the low-calcium "off" state of cardiac muscle. The result: higher resting actin-myosin interaction, enhanced contractility, and — critically — failure of the muscle to fully relax between beats (diastolic dysfunction).

The Evidence

The molecular evidence for E180G's pathogenic mechanism is strong and consistent across independent methods:

Structural mechanics: Li et al., 201266 Li et al., 2012
Li XE et al. Biochem Biophys Res Commun 2012 — examined both D175N and E180G using electron microscopy of isolated tropomyosin molecules; persistence length reductions were statistically significant across >200 molecules per condition
showed increased bending flexibility leads to excess Ca²⁺-activation and shifts regulatory equilibrium toward the "on" state even at diastolic calcium concentrations.

Calcium sensitivity and kinetics: Sewanan et al., 201677 Sewanan et al., 2016
Sewanan LR et al. Front Physiol 2016 — computational myofilament model incorporating E180G-specific stiffness and duty-cycle changes; validated against published in vitro motility data
predicted E180G increases both maximum and diastolic force generation, and slows the time from peak tension to 50% relaxation — a signature of HCM diastolic dysfunction.

Signaling cascades: Robinson et al., 201888 Robinson et al., 2018
Robinson P et al. J Biol Chem 2018 — guinea pig cardiomyocyte model expressing thin-filament HCM mutations including the closely related D175N
demonstrated that increased myofilament calcium buffering from these mutations elevates diastolic calcium and activates CaMKII and calcineurin/NFAT99 CaMKII and calcineurin/NFAT
Two calcium-sensitive kinases that, when chronically activated, trigger gene programs causing hypertrophy, fibrosis, and arrhythmia — the cardinal features of HCM
signaling cascades — providing a mechanism linking the sarcomeric defect to macroscopic cardiac remodeling.

Actin-myosin interaction: Kopylova et al., 20191010 Kopylova et al., 2019
Kopylova GV et al. J Muscle Res Cell Motil 2019 — combined single-molecule optical trap and ensemble in vitro motility assay; both HCM mutations E180G and D175N increased calcium sensitivity in ensemble measurements, whereas dilated cardiomyopathy mutations showed opposite effects
confirmed E180G increases thin-filament sliding velocity and calcium sensitivity in reconstituted assays, in the same direction as D175N — and in the opposite direction from dilated cardiomyopathy TPM1 mutations, validating the disease-specific mechanism.

E180G is ultra-rare globally (absent from gnomAD population databases), consistent with its being a disease-causing variant with strong negative selection pressure. The variant is classified Pathogenic with a 3-star ClinVar review status reflecting consistent classification across multiple independent submitters.

Practical Actions

Identifying an E180G carrier changes clinical management in ways that directly reduce morbidity and mortality. HCM is one of the most common causes of sudden cardiac death in individuals under 35. For carriers, the priorities are: (1) confirm diagnosis and baseline LV morphology, (2) identify high-risk features that warrant ICD implantation or septal reduction therapy, and (3) extend family testing to first-degree relatives. The autosomal dominant inheritance means each biological child of a carrier has a 50% chance of inheriting the variant.

Avoidance of competitive athletics and extreme exertion is recommended pending full clinical evaluation — sudden cardiac death events in HCM are disproportionately exercise-associated.

Interactions

E180G's closely related neighbor on chromosome 15, TPM1 D175N (rs104894503), shares nearly identical functional properties: both increase tropomyosin flexibility and calcium sensitivity, both were identified in the same 1994 paper, and both are classified Pathogenic for HCM. D175N is a Finnish founder mutation (accounting for 6.5% of Finnish HCM cases in a cohort of 306 patients) but is not known to interact with E180G as a compound heterozygote — these are independent dominant mutations in the same gene affecting adjacent codons.

Other sarcomeric protein HCM genes — MYBPC3 (rs36211723), MYH7, TNNT2 — can produce overlapping clinical phenotypes. Patients with multiple sarcomeric variants ("double positive" HCM) tend to have more severe hypertrophy and earlier onset, though compound heterozygosity specifically for E180G has not been studied in published literature.

Genotype Interpretations

What each possible genotype means for this variant:

AA “No E180G Variant” Normal

No TPM1 E180G mutation — standard HCM risk from this variant

You carry two copies of the normal TPM1 allele at this position and do not have the E180G mutation. Your risk of hypertrophic cardiomyopathy from this specific tropomyosin variant is not elevated. Virtually all of the general population shares this result — E180G is absent from gnomAD population databases, reflecting its extreme rarity. Other sarcomeric gene variants (in MYBPC3, MYH7, TNNT2, and others) can independently cause HCM and are not captured by this result.

AG “E180G Carrier” High Risk Critical

Carries one copy of TPM1 E180G — pathogenic for hypertrophic cardiomyopathy

The E180G substitution (c.539A>G, NM_001018005.2) swaps a bulky charged glutamic acid for glycine — the smallest amino acid with no side chain — at a coiled-coil heptad position important for tropomyosin's structural rigidity. Atomic force microscopy of isolated E180G tropomyosin molecules showed a statistically significant ~35% reduction in persistence length (a measure of bending stiffness) compared to wild-type protein. Molecular dynamics simulations confirmed excess local and global flexibility.

Functionally, this means the tropomyosin "off switch" is less effective at blocking actin-myosin interaction at diastolic (resting) calcium levels. The thin filament's regulatory equilibrium is shifted toward the calcium-activated "on" state even when the heart should be relaxing. Downstream: increased myofilament calcium buffering elevates diastolic calcium concentrations, which chronically activates CaMKII and calcineurin/NFAT — kinases that drive cardiomyocyte hypertrophy, interstitial fibrosis, and arrhythmogenic remodeling.

Clinical manifestations in E180G carriers typically include: - Left ventricular hypertrophy (LVH), often asymmetric septal hypertrophy - Diastolic dysfunction (impaired relaxation) with preserved systolic ejection fraction early in the disease course - Symptoms: exertional dyspnea, angina, pre-syncope; occasionally asymptomatic discovered by family screening - Arrhythmia risk: atrial fibrillation; risk of ventricular tachycardia/ fibrillation and sudden cardiac death, particularly during exercise

HCM caused by sarcomeric gene mutations including E180G carries a lifetime risk of sudden cardiac death, which in young patients is most often exercise- associated. Risk stratification (using ESC or AHA HCM guidelines) determines who requires an implantable cardioverter-defibrillator (ICD).

GG “Homozygous E180G” Homozygous Critical

Carries two copies of TPM1 E180G — severe HCM risk, extremely rare

You carry two copies of the TPM1 E180G mutation, one on each chromosome 15. This is an exceptionally rare genotype — E180G is itself absent from population databases (gnomAD), and homozygosity would require two carrier parents. Whether homozygous E180G confers more severe disease than heterozygosity is unknown — no published homozygous E180G cases have been described in the literature. Based on analogous autosomal dominant HCM mutations (including the related TTR Val30Met, where homozygotes did not have markedly worse outcomes than heterozygotes), the disease mechanism is unlikely to be strictly additive, but this is speculative. The management is the same as for AG carriers, with the additional consideration that all biological children will inherit at least one copy of E180G.