|
rs1001179
|
CAT
-262C>T
|
Catalase promoter variant affecting hydrogen peroxide clearance and antioxida...
|
Methylation & Detox
|
|
Strong
|
|
rs1003194
|
CALCA/CALCB
|
Intergenic regulatory variant ~26 kb downstream of CALCB (calcitonin gene-rel...
|
Neurology & Cognition
|
|
Strong
|
|
rs10033464
|
KCNN3
KCNN3 AF susceptibility variant
|
Intergenic 4q25 variant near KCNN3 and PITX2 that confers an independent risk...
|
Arrhythmia & Heart Rhythm
|
|
Strong
|
|
rs1006737
|
CACNA1C
|
L-type calcium channel gene variant affecting mood regulation, emotional proc...
|
Mood & Behavior
|
|
Strong
|
|
rs1008899
|
NEDD4L
|
Intronic NEDD4L variant tagging isoforms with differing ENaC ubiquitination c...
|
Blood Pressure & Hypertension
|
|
Moderate
|
|
rs1010
|
VAMP8
VAMP8 3'UTR Variant
|
Common 3'UTR variant in VAMP8 that disrupts a microRNA-96 binding site, eleva...
|
Von Willebrand & Anticoagulant Proteins
|
|
Moderate
|
|
rs1024611
|
CCL2
A-2518G
|
Promoter variant that increases CCL2 (MCP-1) transcription, amplifying monocy...
|
Vascular Inflammation & Remodeling
|
|
Moderate
|
|
rs1036477
|
FBN1
|
Deep intronic FBN1 variant associated with larger ascending aortic dimensions...
|
Cardiomyopathy & Structural Heart
|
|
Strong
|
|
rs1042713
|
ADRB2
Arg16Gly
|
Beta-2 adrenergic receptor variant affecting receptor downregulation, exercis...
|
Fitness & Body
|
|
Strong
|
|
rs1044250
|
ANGPTL4
T266M
|
Protective missense variant that reduces LPL inhibition, lowering fasting tri...
|
Triglycerides & Fatty Acids
|
|
Moderate
|
|
rs1044317
|
ABCG1
ABCG1 3'UTR variant
|
3'UTR variant in ABCG1 that may reduce transporter expression, impairing chol...
|
Cholesterol & Lipoproteins
|
|
Moderate
|
|
rs10455872
|
LPA
|
Intronic variant strongly associated with elevated lipoprotein(a) levels and ...
|
Atherogenic Lipoproteins
|
|
Established
|
|
rs10509679
|
CYP2C9
|
Intronic CYP2C9 haplotype tag associated with increased ischemic stroke risk ...
|
Coronary Artery Disease & Atherosclerosis
|
|
Emerging
|
|
rs1057516616
|
F11
c.25_28del (p.His9fs)
|
Frameshift deletion in coagulation factor XI causing complete loss of the FXI...
|
Coagulation & Clotting Factors
|
|
Strong
|
|
rs10766197
|
CYP2R1
|
Reduces CYP2R1 promoter activity and hepatic 25-hydroxylase expression, lower...
|
Vitamin D Metabolism
|
|
Strong
|
|
rs1079128
|
SLC2A9
|
Deeply intronic SLC2A9 variant at chromosome 4:9,949,597 (GRCh38) within the ...
|
Uric Acid & Kidney Function
|
|
Emerging
|
|
rs11072566
|
NRG4
NRG4 Variant
|
Common intronic variant at the NRG4 locus; NRG4 is a brown adipose tissue-enr...
|
Liver Fat
|
|
Emerging
|
|
rs10177833
|
SLC4A5
|
Intronic variant in the sodium bicarbonate cotransporter gene strongly associ...
|
Blood Pressure & Hypertension
|
|
Strong
|
|
rs10195252
|
GRB14/COBLL1
|
Intergenic variant between GRB14 and COBLL1 that acts as an eQTL for GRB14 in...
|
Blood Sugar & Diabetes
|
|
Strong
|
|
rs10305492
|
GLP1R
A316T
|
Rare protective missense variant in the GLP-1 receptor associated with lower ...
|
Pharmacogenomics
|
|
Strong
|
|
rs1041981
|
LTA
Thr26Asn (TNFB*2)
|
Missense variant in lymphotoxin-alpha, a TNF superfamily cytokine essential f...
|
Innate Immunity & Infection Defense
|
|
Moderate
|
|
rs104894369
|
MYL2
Arg58Gln
|
Pathogenic missense variant in the cardiac regulatory myosin light chain caus...
|
Cardiomyopathy & Structural Heart
|
|
Established
|
|
rs1049255
|
CYBA
CYBA 3'UTR A640G
|
3'UTR variant in the NADPH oxidase p22-phox subunit affecting superoxide gene...
|
Vascular Inflammation & Remodeling
|
|
Moderate
|
|
rs1057517151
|
F11
c.291del (p.Tyr98fs)
|
Frameshift deletion in coagulation factor XI causing likely-pathogenic partia...
|
Coagulation & Clotting Factors
|
|
Moderate
|
|
rs1058322
|
ADIPOR2
|
Intronic ADIPOR2 variant whose T allele reduces receptor expression in immune...
|
Fat Storage & Energy
|
|
Moderate
|
|
rs10739076
|
PLGRKT
PLGRKT Plasminogen Receptor/Fibrinolysis
|
Intergenic PCOS susceptibility locus downstream of PLGRKT (plasminogen recept...
|
Fertility & Ovarian Function
|
|
Moderate
|
|
rs10846744
|
SCARB1
|
Intronic SCARB1 variant associated with altered HDL-receptor function, subcli...
|
Cholesterol & Lipoproteins
|
|
Moderate
|
|
rs10918594
|
NOS1AP
|
Regulatory variant upstream of NOS1AP (CAPON) associated with QT interval pro...
|
Arrhythmia & Heart Rhythm
|
|
Strong
|
|
rs11220465
|
ST3GAL4
ST3GAL4 VWF/FVIII Modifier
|
Common intronic variant in the ST3GAL4 sialyltransferase gene associated with...
|
Coronary Artery Disease & Atherosclerosis
|
|
Moderate
|
|
rs11591147
|
PCSK9
R46L
|
Loss-of-function variant that naturally lowers LDL cholesterol by 15-28% and ...
|
Atherogenic Lipoproteins
|
|
Established
|
|
rs116843064
|
ANGPTL4
ANGPTL4 E40K
|
Missense variant that reduces ANGPTL4's inhibition of lipoprotein lipase, low...
|
Triglycerides & Fatty Acids
|
|
Strong
|
|
rs121909547
|
SERPINC1
Arg79Cys
|
Pathogenic missense variant in the antithrombin III heparin-binding domain; h...
|
Von Willebrand & Anticoagulant Proteins
|
|
Established
|
|
rs1021737
|
CTH
CTH Ser403Ile
|
Missense variant in CTH (cystathionine gamma-lyase) that impairs transsulfura...
|
Blood Pressure & Hypertension
|
|
Moderate
|
|
rs10278336
|
YKT6
GCK-Region Intronic Variant
|
Intronic variant in YKT6 immediately downstream of GCK; the A allele is a GWA...
|
Blood Sugar & Diabetes
|
|
Moderate
|
|
rs10482605
|
NR3C1
|
NR3C1 promoter variant reducing glucocorticoid receptor transcription; G alle...
|
Longevity & Aging
|
|
Moderate
|
|
rs104894502
|
TPM1
E180G
|
Rare pathogenic missense variant in cardiac alpha-tropomyosin causing familia...
|
Cardiomyopathy & Structural Heart
|
|
Established
|
|
rs1048990
|
PSMA6
PSMA6 -8C>G
|
5'UTR variant that enhances PSMA6 transcription, amplifying proteasome-driven...
|
Innate Immunity & Infection Defense
|
|
Moderate
|
|
rs10505806
|
MGST1
|
Intergenic variant near MGST1 that modifies whether aspirin/NSAIDs reduce col...
|
Vascular Inflammation & Remodeling
|
|
Moderate
|
|
rs1052373
|
MYBPC3
|
Cardiac myosin-binding protein variant strongly associated with endurance ath...
|
Fitness & Body
|
|
Strong
|
|
rs1054564
|
GDF15
GDF15 3'UTR rs1054564
|
3'UTR variant that controls GDF15 expression via microRNA regulation — C alle...
|
Endometriosis & Uterine Health
|
|
Moderate
|
|
rs1059369
|
GDF15
S48T
|
GDF15 signal-peptide missense variant that tags a haplotype influencing circu...
|
Fat Storage & Energy
|
|
Moderate
|
|
rs1061170
|
CFH
Y402H
|
Strongly increases risk of age-related macular degeneration through impaired ...
|
Skin & Eyes
|
|
Established
|
|
rs1064608
|
MTCH2
Pro290Ala
|
Missense variant in MTCH2 that reduces mitochondrial metabolic efficiency, in...
|
Hormones & Sleep
|
|
Moderate
|
|
rs11057830
|
SCARB1
|
Intronic variant in SCARB1 that affects SR-BI receptor function and the intes...
|
Cholesterol & Lipoproteins
|
|
Moderate
|
|
rs11265611
|
IL6R
|
Intronic IL6R variant in LD with the IL-6 receptor signaling locus; G allele ...
|
Coronary Artery Disease & Atherosclerosis
|
|
Moderate
|
|
rs1148259
|
ANKRD30A
|
Synonymous variant in the 3′ UTR of ANKRD30A associated with altered circulat...
|
Metabolic Enzymes & Rare Disorders
|
|
Emerging
|
|
rs11857380
|
LIPC
|
Intronic LIPC variant tagging reduced hepatic lipase expression; G allele ass...
|
Triglycerides & Fatty Acids
|
|
Moderate
|
|
rs121909548
|
SERPINC1
Cambridge II (A384S)
|
Missense variant in antithrombin (SERPINC1) that impairs heparin-catalyzed th...
|
Von Willebrand & Anticoagulant Proteins
|
|
Strong
|
|
rs121965063
|
F11
Glu117Stop (Type II)
|
Ashkenazi Jewish founder nonsense mutation in coagulation factor XI causing s...
|
Coagulation & Clotting Factors
|
|
Established
|
|
rs12232375
|
ZFPM1
ZFPM1 Hematology/Cardiac Locus Variant
|
Intronic ZFPM1 variant tagging reduced GATA cofactor regulatory activity; the...
|
Arrhythmia & Heart Rhythm
|
|
Strong
|
|
rs12487736
|
SCAP
SCAP Val798Ile
|
Missense variant in the SCAP cholesterol-sensor gene (Val798Ile); the C allel...
|
Atherogenic Lipoproteins
|
|
Moderate
|
|
rs10423928
|
GIPR
|
Intronic GIPR variant that reduces functional GIP receptor expression via alt...
|
Blood Sugar & Diabetes
|
|
Strong
|
|
rs10483099
|
QDPR
|
Intronic variant near QDPR that affects BH4 recycling efficiency, influencing...
|
Methylation & Detox
|
|
Emerging
|
|
rs104894503
|
TPM1
D175N (Asp175Asn)
|
Pathogenic alpha-tropomyosin missense variant that increases thin filament ca...
|
Cardiomyopathy & Structural Heart
|
|
Established
|
|
rs10507391
|
ALOX5AP
SG13S114 intron variant
|
Intronic ALOX5AP variant in the HapA haplotype; the A allele is associated wi...
|
Vascular Inflammation & Remodeling
|
|
Moderate
|
|
rs1053049
|
PPARD
3'UTR variant
|
3'UTR variant in PPARD that acts as the third tag in the elite athlete haplot...
|
Fitness & Body
|
|
Moderate
|
|
rs1063537
|
ADIPOQ
|
3'UTR variant in ADIPOQ that modulates adiponectin mRNA stability; the common...
|
Fat Storage & Energy
|
|
Moderate
|
|
rs10841496
|
PDE3A
|
5' UTR variant in phosphodiesterase 3A that may alter PDE3A expression, affec...
|
Blood Pressure & Hypertension
|
|
Emerging
|
|
rs11057841
|
SCARB1
|
Intronic variant in SCARB1 that tags a haplotype affecting SR-BI receptor-med...
|
Cholesterol & Lipoproteins
|
|
Moderate
|
|
rs115532916
|
ACAD9
ACAD9 Ala326Pro
|
Pathogenic missense variant in acyl-CoA dehydrogenase family member 9, causin...
|
Metabolic Enzymes & Rare Disorders
|
|
Strong
|
|
rs11556924
|
ZC3HC1
R363H
|
Missense variant in ZC3HC1/NIPA altering cell cycle regulation; the T (His363...
|
Coronary Artery Disease & Atherosclerosis
|
|
Strong
|
|
rs121909567
|
SERPINC1
Budapest 3 (Leu131Phe)
|
Pathogenic missense in antithrombin III; the A allele causes type II heparin-...
|
Von Willebrand & Anticoagulant Proteins
|
|
Established
|
|
rs121965064
|
F11
Phe301Leu (Type III)
|
Ashkenazi Jewish founder missense mutation in coagulation factor XI causing i...
|
Coagulation & Clotting Factors
|
|
Established
|
|
rs12593008
|
LIPC
|
Intronic LIPC variant in intron 1 associated with low HDL risk, predominantly...
|
Triglycerides & Fatty Acids
|
|
Moderate
|
|
rs12785878
|
DHCR7
Near gene T>G
|
Influences vitamin D synthesis by regulating how much 7-dehydrocholesterol is...
|
Vitamin D Metabolism
|
|
Strong
|
|
rs137852912
|
PCSK9
D374Y
|
The most severe gain-of-function PCSK9 mutation, increasing LDLR-binding affi...
|
Atherogenic Lipoproteins
|
|
Established
|
|
rs17175830
|
ZFPM1
ZFPM1 intronic variant
|
Intronic variant in ZFPM1 (FOG1), the master transcriptional co-regulator of ...
|
Arrhythmia & Heart Rhythm
|
|
Strong
|
|
rs1044498
|
ENPP1
K121Q
|
ENPP1 K121Q variant that increases ENPP1 binding affinity to the insulin rece...
|
Blood Sugar & Diabetes
|
|
Strong
|
|
rs1045642
|
ABCB1
C3435T
|
Synonymous variant in P-glycoprotein affecting drug efflux pump expression an...
|
Pharmacogenomics
|
|
Moderate
|
|
rs1048943
|
CYP1A1
Ile462Val (*2C)
|
Phase I detoxification enzyme that activates polycyclic aromatic hydrocarbons...
|
Methylation & Detox
|
|
Strong
|
|
rs104894654
|
DTNA
P121L
|
Missense variant in alpha-dystrobrevin disrupting the EF-hand calcium-binding...
|
Cardiomyopathy & Structural Heart
|
|
Emerging
|
|
rs1060502576
|
BMPR2
|
Rare stop-gain variant in BMPR2 (p.Trp466Ter) that truncates the kinase domai...
|
Vascular Inflammation & Remodeling
|
|
Established
|
|
rs10759931
|
TLR4
-2604G>A
|
Promoter variant in Toll-like receptor 4 that drives higher TLR4 expression a...
|
Innate Immunity & Infection Defense
|
|
Moderate
|
|
rs10848554
|
ADIPOR2
|
Intronic ADIPOR2 variant co-associated with cardiovascular disease risk in in...
|
Fat Storage & Energy
|
|
Moderate
|
|
rs10852521
|
FTO
|
FTO intron 1 variant associated with BMI and body fat accumulation, with stro...
|
Fitness & Body
|
|
Moderate
|
|
rs10882398
|
PLCE1
|
Intronic PLCE1 variant where the A allele raises systolic blood pressure and ...
|
Blood Pressure & Hypertension
|
|
Strong
|
|
rs10936599
|
TERC
Near gene (3q26.2)
|
Near-TERC regulatory variant where the minor T allele associates with shorter...
|
Longevity & Aging
|
|
Established
|
|
rs1125226
|
CYP7A1
CYP7A1 upstream promoter variant
|
Upstream regulatory variant in CYP7A1 that tags haplotypes affecting bile aci...
|
Cholesterol & Lipoproteins
|
|
Emerging
|
|
rs11881940
|
HNRNPUL1
|
Intronic variant in HNRNPUL1, an RNA-processing gene highly expressed in macr...
|
Coronary Artery Disease & Atherosclerosis
|
|
Moderate
|
|
rs121909569
|
SERPINC1
Ser148Pro
|
Likely pathogenic missense variant in antithrombin III; the G allele converts...
|
Von Willebrand & Anticoagulant Proteins
|
|
Strong
|
|
rs1260326
|
GCKR
P446L
|
Coding GCKR variant (Pro446Leu) that directly reduces GCKRP sensitivity to fr...
|
Liver Fat
|
|
Strong
|
|
rs12678919
|
LPL
|
Intergenic variant 19 kb downstream of lipoprotein lipase (LPL) that tags a r...
|
Triglycerides & Fatty Acids
|
|
Strong
|
|
rs13412535
|
SERPINE2
|
Intronic regulatory variant in SERPINE2 that modulates expression of Protease...
|
Coagulation & Clotting Factors
|
|
Strong
|
|
rs137853964
|
LDLR
Val827Ile / Val827Phe
|
LDLR missense variant at position 827 within the cytoplasmic NPXY internaliza...
|
Atherogenic Lipoproteins
|
|
Moderate
|
|
rs16930609
|
CYP2R1
|
Upstream regulatory variant in CYP2R1 that tags a haplotype associated with r...
|
Vitamin D Metabolism
|
|
Moderate
|
|
rs1805123
|
KCNH2
K897T
|
Common KCNH2 missense variant that alters hERG potassium channel kinetics, sh...
|
Arrhythmia & Heart Rhythm
|
|
Strong
|
|
rs10405121
|
CACNA1A
|
Common intronic variant in CACNA1A — the P/Q-type calcium channel gene mutate...
|
Neurology & Cognition
|
|
Strong
|
|
rs104894664
|
TTR
Ala45Thr (A25T)
|
Rare pathogenic TTR missense variant causing hereditary transthyretin amyloid...
|
Cardiomyopathy & Structural Heart
|
|
Strong
|
|
rs1060502581
|
BMPR2
|
Nonsense variant in BMPR2 introducing a premature stop codon (p.Arg321Ter) th...
|
Vascular Inflammation & Remodeling
|
|
Established
|
|
rs10865710
|
PPARG
PPARG C-681G
|
PPARG promoter-region enhancer variant that reduces PPARgamma expression, inc...
|
Fat Storage & Energy
|
|
Moderate
|
|
rs11568822
|
APOC1
APOC1 HCR-1 promoter variant
|
Promoter insertion variant in APOC1 that increases gene transcription by 50%,...
|
Cholesterol & Lipoproteins
|
|
Moderate
|
|
rs1173771
|
NPR3
NPR3 promoter variant
|
Regulatory variant near the NPR3 transcription start site that reduces natriu...
|
Blood Pressure & Hypertension
|
|
Strong
|
|
rs11942223
|
SLC2A9
|
Intronic SLC2A9 variant tagging an independent urate-transport signal; the pr...
|
Uric Acid & Kidney Function
|
|
Strong
|
|
rs12095080
|
DIO1
DIO1 cardiac mortality variant
|
3' UTR variant in the type 1 deiodinase gene associated with markedly increas...
|
Coronary Artery Disease & Atherosclerosis
|
|
Emerging
|
|
rs121918473
|
PROS1
Asn258Ser
|
Pathogenic PROS1 missense variant in the fourth EGF domain of protein S; hete...
|
Von Willebrand & Anticoagulant Proteins
|
|
Strong
|
|
rs13236689
|
CD36
|
Intronic CD36 variant that acts as a platelet eQTL, modulating CD36 surface e...
|
Triglycerides & Fatty Acids
|
|
Moderate
|
|
rs1378577
|
ABCG1
ABCG1 ischemic stroke variant
|
Regulatory variant ~2kb upstream of ABCG1 that modulates transporter expressi...
|
Atherogenic Lipoproteins
|
|
Moderate
|
|
rs1776897
|
HMGA1
|
Chromatin remodeling variant near HMGA1 associated with waist-to-hip ratio an...
|
Liver Fat
|
|
Moderate
|
|
rs1799889
|
SERPINE1
PAI-1 4G/5G Promoter
|
Promoter insertion/deletion polymorphism that controls PAI-1 (plasminogen act...
|
Coagulation & Clotting Factors
|
|
Strong
|
|
rs1993116
|
CYP2R1
CYP2R1 rs1993116
|
Intronic regulatory variant in CYP2R1 that reduces hepatic vitamin D 25-hydro...
|
Vitamin D Metabolism
|
|
Moderate
|
|
rs199473521
|
KCNH2
K595N
|
Ultra-rare KCNH2 missense variant substituting asparagine for lysine at posit...
|
Arrhythmia & Heart Rhythm
|
|
Moderate
|
|
rs104894797
|
DMD
Arg3182Ter (R3182*)
|
Pathogenic nonsense variant in dystrophin creating a premature stop codon at ...
|
Cardiomyopathy & Structural Heart
|
|
Established
|
|
rs10889160
|
CYP2J2
|
Intronic CYP2J2 tag SNP; the C allele marks a haplotype associated with reduc...
|
Vascular Inflammation & Remodeling
|
|
Moderate
|
|
rs11206244
|
DIO1
C785T
|
Common variant in the 3' UTR of the DIO1 gene affecting thyroid hormone metab...
|
Hormones & Sleep
|
|
Strong
|
|
rs121918474
|
PROS1
K196E (Lys196Glu)
|
Pathogenic missense variant in protein S causing autosomal dominant thromboph...
|
Von Willebrand & Anticoagulant Proteins
|
|
Established
|
|
rs12402521
|
PDC
|
Intronic PDC variant in the phosducin gene — G homozygotes show 12–15 mmHg hi...
|
Coronary Artery Disease & Atherosclerosis
|
|
Moderate
|
|
rs1256335
|
ALPL
|
Intronic variant near ALPL associated with increased alkaline phosphatase act...
|
Vitamins & Nutrient Absorption
|
|
Strong
|
|
rs13702
|
LPL
|
LPL 3'UTR variant disrupting a microRNA-410 binding site; the C allele abolis...
|
Triglycerides & Fatty Acids
|
|
Strong
|
|
rs1799963
|
F2
G20210A
|
Second most common inherited thrombophilia; the A allele raises prothrombin l...
|
Coagulation & Clotting Factors
|
|
Established
|
|
rs1800588
|
LIPC
-514C>T
|
Promoter variant that reduces hepatic lipase activity, raising HDL-C levels b...
|
Atherogenic Lipoproteins
|
|
Strong
|
|
rs1800591
|
MTTP
MTTP -493G/T
|
Promoter-region variant in MTTP that reduces hepatic MTTP transcription; the ...
|
Liver Fat
|
|
Moderate
|
|
rs2060793
|
CYP2R1
|
Upstream regulatory variant in CYP2R1 that reduces hepatic 25-hydroxylase exp...
|
Vitamin D Metabolism
|
|
Strong
|
|
rs2200733
|
PITX2
PITX2 4q25 AF susceptibility variant
|
Intergenic variant at chromosome 4q25 near PITX2 — the strongest GWAS signal ...
|
Arrhythmia & Heart Rhythm
|
|
Strong
|
|
rs104894805
|
EMD
Pro183His (P183H)
|
Pathogenic missense variant in emerin that weakens nuclear lamina interaction...
|
Cardiomyopathy & Structural Heart
|
|
Established
|
|
rs1050450
|
GPX1
Pro198Leu
|
Selenium-dependent antioxidant enzyme that neutralizes hydrogen peroxide; the...
|
Methylation & Detox
|
|
Strong
|
|
rs1058932
|
CYP2C8
|
CYP2C8 3-prime UTR variant associated with cardiovascular risk via altered ep...
|
Pharmacogenomics
|
|
Moderate
|
|
rs10958409
|
SOX17
|
Intergenic variant near SOX17 at 8q11 that reduces expression of this endothe...
|
Vascular Inflammation & Remodeling
|
|
Strong
|
|
rs11061937
|
ADIPOR2
ADIPOR2 rs11061937
|
Intronic ADIPOR2 variant associated with cardiovascular disease risk in indiv...
|
Fat Storage & Energy
|
|
Moderate
|
|
rs11555236
|
SIRT3
|
Intronic regulatory variant near the SIRT3 VNTR enhancer — the A allele incre...
|
Longevity & Aging
|
|
Moderate
|
|
rs121918383
|
APOB
APOB Arg1333Ter
|
Nonsense mutation in APOB creating a premature stop codon at position 1333, t...
|
Cholesterol & Lipoproteins
|
|
Strong
|
|
rs121918475
|
PROS1
Q279X
|
Pathogenic nonsense variant in protein S that eliminates the anticoagulant co...
|
Von Willebrand & Anticoagulant Proteins
|
|
Established
|
|
rs12740374
|
SORT1
1p13.3 locus
|
Regulatory variant that increases sortilin expression, lowering LDL cholester...
|
Coronary Artery Disease & Atherosclerosis
|
|
Established
|
|
rs13193677
|
TRAF3IP2
|
Intronic variant near the TRAF3IP2 locus (annotated in IPCEF1 at chr6q25.2 by...
|
Psoriasis & Spondyloarthropathy
|
|
Moderate
|
|
rs150090666
|
PDE3B
PDE3B R783X
|
Loss-of-function variant in phosphodiesterase 3B — carriers have enhanced cAM...
|
Triglycerides & Fatty Acids
|
|
Strong
|
|
rs17249754
|
ATP2B1
|
Intronic variant in the ATP2B1 calcium pump gene; the common G allele reduces...
|
Blood Pressure & Hypertension
|
|
Strong
|
|
rs1800595
|
F5
HR2 haplotype (H1299R / R2)
|
Factor V HR2 haplotype — a missense variant that mildly impairs the anticoagu...
|
Coagulation & Clotting Factors
|
|
Moderate
|
|
rs1800871
|
IL10
-819 C>T
|
Promoter variant in the IL-10 haplotype system — regulates IL-10 anti-inflamm...
|
Interferon Signaling & Systemic Autoimmune
|
|
Strong
|
|
rs1801690
|
APOH
Trp316Ser
|
Missense variant in APOH (beta-2-glycoprotein I) that disrupts the phospholip...
|
Atherogenic Lipoproteins
|
|
Moderate
|
|
rs199673455
|
GPD1
|
Pathogenic missense variant in glycerol-3-phosphate dehydrogenase 1; homozygo...
|
Liver Fat
|
|
Strong
|
|
rs2228570
|
VDR
FokI C>T
|
Vitamin D receptor start codon variant — determines receptor protein length a...
|
Vitamin D Metabolism
|
|
Strong
|
|
rs28634651
|
ZFPM1
|
Common intronic variant in the FOG1 megakaryocyte transcription factor gene t...
|
Arrhythmia & Heart Rhythm
|
|
Moderate
|
|
rs10519177
|
FBN1
|
Intronic FBN1 variant that requires two copies of the G allele to impair fibr...
|
Cardiomyopathy & Structural Heart
|
|
Emerging
|
|
rs11572325
|
CYP2J2
|
Intronic CYP2J2 variant associated with increased myocardial infarction risk ...
|
Vascular Inflammation & Remodeling
|
|
Moderate
|
|
rs121918384
|
APOB
APOB Val1856fs
|
Frameshift deletion in APOB causing truncated apolipoprotein B-100, reducing ...
|
Cholesterol & Lipoproteins
|
|
Strong
|
|
rs121918393
|
APOE
Christchurch (R136S)
|
Ultra-rare APOE3 missense variant that dramatically reduces HSPG binding and ...
|
Longevity & Aging
|
|
Strong
|
|
rs121918476
|
PROS1
Arg561Trp
|
Pathogenic PROS1 missense variant in the SHBG-like domain that impairs protei...
|
Von Willebrand & Anticoagulant Proteins
|
|
Strong
|
|
rs12917707
|
UMOD
|
Uromodulin promoter variant — strongest GWAS signal for chronic kidney diseas...
|
Uric Acid & Kidney Function
|
|
Established
|
|
rs13324341
|
MRAS
|
Intronic MRAS variant that creates a MEF2 transcription factor binding site i...
|
Coronary Artery Disease & Atherosclerosis
|
|
Strong
|
|
rs1532085
|
LIPC
|
Intronic eQTL that reduces hepatic lipase expression, raising HDL-C levels wh...
|
Triglycerides & Fatty Acids
|
|
Strong
|
|
rs1743963
|
SGK1
|
Intronic SGK1 variant associated with depression susceptibility in coronary h...
|
Blood Pressure & Hypertension
|
|
Emerging
|
|
rs1799945
|
HFE
H63D
|
Second most common hereditary hemochromatosis variant, mildly increasing iron...
|
Iron & Mineral Transport
|
|
Established
|
|
rs1800787
|
FGB
-148C>T
|
Upstream promoter variant in fibrinogen beta chain that elevates circulating ...
|
Coagulation & Clotting Factors
|
|
Strong
|
|
rs1800896
|
IL10
-1082 A>G
|
Promoter variant affecting IL-10 production — the master anti-inflammatory cy...
|
Interferon Signaling & Systemic Autoimmune
|
|
Strong
|
|
rs186021206
|
ASGR1
|
Intergenic tag SNP 7.3 kb downstream of ASGR1; the rare A allele proxies the ...
|
Atherogenic Lipoproteins
|
|
Strong
|
|
rs2228603
|
NCAN
T130M (Pro92Ser)
|
Missense variant in neurocan associated with hepatic steatosis, liver inflamm...
|
Liver Fat
|
|
Moderate
|
|
rs28937317
|
SCN5A
N1325S
|
Rare gain-of-function missense variant in the cardiac sodium channel Nav1.5 c...
|
Arrhythmia & Heart Rhythm
|
|
Established
|
|
rs1057518309
|
DSP
Arg451Gly
|
Rare pathogenic missense variant in desmoplakin that enhances calpain-mediate...
|
Cardiomyopathy & Structural Heart
|
|
Strong
|
|
rs11172113
|
LRP1
|
Intronic enhancer variant in LRP1 that regulates receptor expression in brain...
|
Fat Storage & Energy
|
|
Moderate
|
|
rs11967262
|
VEGFA
|
Regulatory variant ~7 kb upstream of VEGFA linked to elevated varicose vein r...
|
Vascular Inflammation & Remodeling
|
|
Moderate
|
|
rs121918385
|
APOB
APOB Glu4034fs
|
Frameshift deletion in APOB that truncates apolipoprotein B, causing familial...
|
Cholesterol & Lipoproteins
|
|
Strong
|
|
rs13154066
|
NPR3
|
Regulatory variant near the NPR3 natriuretic peptide clearance receptor gene ...
|
Endometriosis & Uterine Health
|
|
Strong
|
|
rs1333040
|
CDKN2B-AS1
|
9p21 locus variant in the ANRIL long non-coding RNA gene associated with intr...
|
Coronary Artery Disease & Atherosclerosis
|
|
Strong
|
|
rs1535
|
FADS2
|
Intronic FADS2 variant with stronger independent associations than rs174575 f...
|
Triglycerides & Fatty Acids
|
|
Strong
|
|
rs1799998
|
CYP11B2
-344C>T
|
Promoter variant in aldosterone synthase increasing CYP11B2 transcription, as...
|
Blood Pressure & Hypertension
|
|
Moderate
|
|
rs1800380
|
VWF
Arg960= (synonymous)
|
Common synonymous variant in the VWF D2/D' domain region; the T allele is par...
|
Von Willebrand & Anticoagulant Proteins
|
|
Strong
|
|
rs1800562
|
HFE
C282Y
|
Primary variant causing hereditary hemochromatosis type 1, disrupting iron re...
|
Iron & Mineral Transport
|
|
Established
|
|
rs1800629
|
TNF
-308 G>A
|
Promoter variant increasing TNF-alpha production approximately 2-fold, associ...
|
TNF, NF-kB & Inflammatory Cytokines
|
|
Strong
|
|
rs1800788
|
FGB
-854G>A
|
Upstream promoter variant in fibrinogen beta chain that increases IL-6-driven...
|
Coagulation & Clotting Factors
|
|
Moderate
|
|
rs2131925
|
ANGPTL3
DOCK7/ANGPTL3 Locus Tag SNP
|
Intronic tag SNP in the DOCK7/ANGPTL3 region; the T allele is associated with...
|
Atherogenic Lipoproteins
|
|
Strong
|
|
rs28937319
|
SCN5A
SCN5A Cardiac Sodium Channel Variant 2
|
Rare loss-of-function missense variant in the cardiac sodium channel Nav1.5 c...
|
Arrhythmia & Heart Rhythm
|
|
Strong
|
|
rs10811661
|
CDKN2B
|
Regulatory variant upstream of CDKN2A/CDKN2B at the 9p21 locus; the T risk al...
|
Blood Sugar & Diabetes
|
|
Strong
|
|
rs111517471
|
PKP2
|
Splice donor variant in plakophilin-2 that disrupts mRNA splicing at an exon–...
|
Cardiomyopathy & Structural Heart
|
|
Strong
|
|
rs1205
|
CRP
+1846C>T
|
3' UTR variant that modulates baseline C-reactive protein levels and inflamma...
|
Vascular Inflammation & Remodeling
|
|
Strong
|
|
rs121918386
|
APOB
APOB Arg2085Ter
|
Nonsense mutation in APOB creating a premature stop codon at position 2085, p...
|
Cholesterol & Lipoproteins
|
|
Strong
|
|
rs12212067
|
FOXO3
|
Intronic FOXO3 variant whose minor G allele creates an MZF1 transcription fac...
|
Longevity & Aging
|
|
Strong
|
|
rs17301739
|
LIPC
|
Intronic LIPC variant associated with circulating DHA and omega-3 fatty acid ...
|
Triglycerides & Fatty Acids
|
|
Strong
|
|
rs1799750
|
MMP1
1G/2G
|
Promoter polymorphism affecting MMP1 expression and collagen degradation rate...
|
Skin & Eyes
|
|
Strong
|
|
rs1800386
|
VWF
Tyr1584Cys
|
Low-penetrance variant in von Willebrand factor that causes enhanced protein ...
|
Von Willebrand & Anticoagulant Proteins
|
|
Strong
|
|
rs1800730
|
HFE
S65C
|
Third HFE variant associated with hemochromatosis; mildly impairs iron regula...
|
Iron & Mineral Transport
|
|
Moderate
|
|
rs1800789
|
FGB
-249G>A
|
Upstream promoter variant in fibrinogen beta chain that is associated with lo...
|
Coagulation & Clotting Factors
|
|
Moderate
|
|
rs2004776
|
AGT
|
Intronic regulatory variant in angiotensinogen intron I that enhances HNF3β t...
|
Blood Pressure & Hypertension
|
|
Strong
|
|
rs2282679
|
GC
|
Intronic GWAS tag variant in the vitamin D binding protein gene, the stronges...
|
Vitamin D Metabolism
|
|
Established
|
|
rs28942111
|
PCSK9
S127R
|
Gain-of-function PCSK9 missense variant (Ser127Arg) causing autosomal dominan...
|
Atherogenic Lipoproteins
|
|
Established
|
|
rs2911463
|
PIEZO1
|
Intronic variant in PIEZO1, the endothelial mechanosensory ion channel that s...
|
Arrhythmia & Heart Rhythm
|
|
Strong
|
|
rs10885122
|
ADRA2A
ADRA2A Beta-Cell cAMP Variant
|
Intergenic variant near ADRA2A that modulates alpha-2A adrenergic receptor ex...
|
Blood Sugar & Diabetes
|
|
Moderate
|
|
rs11570112
|
MYBPC3
Gln998X
|
Pathogenic truncating variant in cardiac myosin-binding protein C causing hap...
|
Cardiomyopathy & Structural Heart
|
|
Established
|
|
rs121918387
|
APOB
ApoB-67 frameshift
|
Single-nucleotide deletion in APOB creating a truncated apolipoprotein B (Apo...
|
Cholesterol & Lipoproteins
|
|
Strong
|
|
rs12696304
|
TERC
|
Regulatory variant near the telomerase RNA gene associated with shorter telom...
|
Longevity & Aging
|
|
Established
|
|
rs12704795
|
PON2
PON2 intron 1 variant
|
Intronic PON2 haplotype tag; the A allele is associated with reduced intracel...
|
Vascular Inflammation & Remodeling
|
|
Moderate
|
|
rs12970134
|
MC4R
MC4R region variant
|
Near-gene variant ~188kb downstream of MC4R associated with increased waist c...
|
Appetite & Obesity
|
|
Strong
|
|
rs1360590
|
CDKN2BAS
|
Intronic variant in ANRIL at the 9p21.3 locus — the shared susceptibility reg...
|
Coronary Artery Disease & Atherosclerosis
|
|
Moderate
|
|
rs1611115
|
DBH
-1021C>T
|
Strongest known genetic determinant of dopamine beta-hydroxylase activity, co...
|
Mood & Behavior
|
|
Strong
|
|
rs16890979
|
SLC2A9
|
Missense variant in the GLUT9 renal urate transporter; the T allele (Val→Ile ...
|
Uric Acid & Kidney Function
|
|
Moderate
|
|
rs17321515
|
TRIB1
|
Near-gene variant 30–44 kb downstream of TRIB1; A allele raises triglycerides...
|
Triglycerides & Fatty Acids
|
|
Strong
|
|
rs1800790
|
FGB
-455G>A
|
Promoter variant in the fibrinogen beta-chain gene that upregulates FGB trans...
|
Coagulation & Clotting Factors
|
|
Strong
|
|
rs2070699
|
EDN1
EDN1 G2288T Intronic Variant
|
Intronic EDN1 variant modulating endothelin-1 expression; the T allele associ...
|
Blood Pressure & Hypertension
|
|
Moderate
|
|
rs216311
|
VWF
Thr1381Ala
|
Missense variant in VWF at codon 1381 (Thr→Ala); the Ala allele (C on plus st...
|
Von Willebrand & Anticoagulant Proteins
|
|
Moderate
|
|
rs2303729
|
LTBP4
|
Missense variant in LTBP4 encoding Val194Ile; the A allele (Ile) forms the IA...
|
Gamete Quality & DNA Repair
|
|
Strong
|
|
rs2968863
|
KCNH2
|
Intergenic variant near KCNH2 (hERG potassium channel) at 7q36.1 that shorten...
|
Arrhythmia & Heart Rhythm
|
|
Moderate
|
|
rs3798220
|
LPA
Ile4399Met (I4399M)
|
Missense variant in the protease-like domain of apolipoprotein(a) causing mar...
|
Atherogenic Lipoproteins
|
|
Strong
|
|
rs11136000
|
CLU
|
Intronic variant in clusterin gene affecting Alzheimer's disease risk through...
|
Neurology & Cognition
|
|
Established
|
|
rs11590235
|
SKI
|
TGF-beta signaling regulator variant identified as the top shared locus betwe...
|
Cardiomyopathy & Structural Heart
|
|
Moderate
|
|
rs121918388
|
APOB
APOB Q2279X
|
Nonsense variant creating a premature stop codon at amino acid 2279 of apolip...
|
Cholesterol & Lipoproteins
|
|
Strong
|
|
rs13107325
|
SLC39A8
A391T
|
Zinc and manganese transporter variant that reduces metal ion absorption, aff...
|
IBD & Mucosal Immunity
|
|
Strong
|
|
rs137852641
|
NOTCH3
|
Pathogenic NOTCH3 missense variant p.Arg332Cys that alters the cysteine count...
|
Vascular Inflammation & Remodeling
|
|
Established
|
|
rs137852769
|
HADHA
p.Glu510Gln
|
Most common LCHAD deficiency variant; homozygosity causes severe mitochondria...
|
Metabolic Enzymes & Rare Disorders
|
|
Established
|
|
rs1501299
|
ADIPOQ
+276G>T
|
Intronic variant in the adiponectin gene that influences circulating adiponec...
|
Coronary Artery Disease & Atherosclerosis
|
|
Moderate
|
|
rs16147
|
NPY
C-399T
|
Promoter variant in neuropeptide Y that modulates NPY expression under stress...
|
Mood & Behavior
|
|
Moderate
|
|
rs174535
|
MYRF
|
Missense variant in the MYRF/FADS gene cluster region on chromosome 11 associ...
|
Triglycerides & Fatty Acids
|
|
Moderate
|
|
rs1801020
|
F12
46C>T
|
5' UTR variant that reduces Factor XII translation efficiency, lowering plasm...
|
Coagulation & Clotting Factors
|
|
Moderate
|
|
rs1898830
|
TLR2
|
Intronic TLR2 variant that modulates innate immune signaling intensity; G all...
|
Innate Immunity & Infection Defense
|
|
Moderate
|
|
rs2018643
|
SLC2A9
SLC2A9 rs2018643
|
Intronic SLC2A9 variant at the major urate-transporter locus on chromosome 4;...
|
Uric Acid & Kidney Function
|
|
Moderate
|
|
rs2270915
|
NPR3
N521D
|
Missense variant in NPR3 clearance receptor disrupting Gi protein coupling, i...
|
Blood Pressure & Hypertension
|
|
Moderate
|
|
rs2288904
|
SLC44A2
R154Q
|
Missense variant that impairs platelet-neutrophil binding and blocks flow-dep...
|
Von Willebrand & Anticoagulant Proteins
|
|
Strong
|
|
rs2968864
|
KCNH2
KCNH2 QT interval GWAS variant (7q36.1)
|
Intergenic variant at 7q36.1 near KCNH2 (hERG potassium channel) that modulat...
|
Arrhythmia & Heart Rhythm
|
|
Strong
|
|
rs3829251
|
NADSYN1
|
Intronic NADSYN1 variant at the DHCR7/NADSYN1 vitamin D locus; A allele was t...
|
Vitamin D Metabolism
|
|
Strong
|
|
rs4149338
|
ABCA1
ABCA1 3'UTR Stroke-Associated Variant
|
3'UTR variant in the ATP-binding cassette transporter A1 gene; the G allele (...
|
Atherogenic Lipoproteins
|
|
Emerging
|
|
rs121918389
|
APOB
Q1477X (apoB-32)
|
Nonsense mutation producing a severely truncated apolipoprotein B (apoB-32) t...
|
Cholesterol & Lipoproteins
|
|
Strong
|
|
rs128627256
|
DMD
Arg2905Ter (R2905X)
|
Nonsense variant in dystrophin that eliminates full-length protein, causing X...
|
Cardiomyopathy & Structural Heart
|
|
Established
|
|
rs13217795
|
FOXO3
|
Original 2008 Willcox longevity discovery variant; C allele tags the protecti...
|
Longevity & Aging
|
|
Strong
|
|
rs13900
|
CCL2
CCL2 3'UTR variant
|
3'UTR variant that increases CCL2 mRNA stability via enhanced HuR binding, el...
|
Vascular Inflammation & Remodeling
|
|
Moderate
|
|
rs17228212
|
SMAD3
|
Intronic variant in the TGF-beta signaling gene SMAD3 associated with vascula...
|
Coronary Artery Disease & Atherosclerosis
|
|
Moderate
|
|
rs174537
|
FADS1
|
Regulatory variant in the FADS1 locus that controls delta-5 desaturase expres...
|
Triglycerides & Fatty Acids
|
|
Strong
|
|
rs17782313
|
MC4R
Near-gene C>T
|
Intergenic variant 188kb downstream of MC4R affecting appetite regulation, me...
|
Appetite & Obesity
|
|
Strong
|
|
rs201007090
|
F11
Trp519Stop
|
Nonsense mutation in coagulation factor XI creating a premature stop codon, c...
|
Coagulation & Clotting Factors
|
|
Established
|
|
rs2078267
|
SLC22A11
|
Intronic variant in the OAT4 renal urate transporter that modulates uric acid...
|
Uric Acid & Kidney Function
|
|
Strong
|
|
rs2301612
|
ADAMTS13
Q448E
|
Common ADAMTS13 missense variant substituting glutamate for glutamine at posi...
|
Von Willebrand & Anticoagulant Proteins
|
|
Moderate
|
|
rs2681472
|
ATP2B1
|
Intronic regulatory variant near the PMCA1 calcium pump gene, one of the most...
|
Blood Pressure & Hypertension
|
|
Strong
|
|
rs397508068
|
KCNQ1
Phe340del
|
Pathogenic in-frame 3-bp deletion in the KCNQ1 potassium channel that removes...
|
Arrhythmia & Heart Rhythm
|
|
Established
|
|
rs4225
|
APOC3
APOC3 3'UTR c.*71G>T
|
3'UTR variant that creates a microRNA-4271 binding site; the T allele suppres...
|
Atherogenic Lipoproteins
|
|
Moderate
|
|
rs4588
|
GC
Thr436Lys
|
Alters vitamin D binding protein affinity, affecting total and bioavailable 2...
|
Vitamin D Metabolism
|
|
Strong
|
|
rs1175543
|
PPARG
PPARG rs1175543
|
Intronic PPARG variant in strong linkage disequilibrium with rs709158; the G ...
|
Fat Storage & Energy
|
|
Emerging
|
|
rs121918390
|
APOB
APOB R2522X
|
Nonsense mutation truncating apolipoprotein B at residue 2522, causing famili...
|
Cholesterol & Lipoproteins
|
|
Strong
|
|
rs1333049
|
CDKN2B-AS1
9p21 locus
|
Strongest GWAS signal for coronary artery disease; risk C allele accelerates ...
|
Longevity & Aging
|
|
Established
|
|
rs140597
|
FBN1
D1113G
|
Pathogenic missense variant in fibrillin-1 replacing the calcium-coordinating...
|
Cardiomyopathy & Structural Heart
|
|
Strong
|
|
rs16944
|
IL1B
-511C>T
|
Promoter variant affecting IL-1 beta production, influencing inflammatory res...
|
Vascular Inflammation & Remodeling
|
|
Strong
|
|
rs174541
|
FADS1
FADS1 C>G (delta-5 desaturase depth)
|
Intronic regulatory variant in FADS1 that reduces delta-5 desaturase expressi...
|
Triglycerides & Fatty Acids
|
|
Strong
|
|
rs1746048
|
CXCL12
|
Regulatory variant 80 kb downstream of CXCL12 on chromosome 10q11; the T alle...
|
Coronary Artery Disease & Atherosclerosis
|
|
Strong
|
|
rs2066865
|
FGG
10034C>T
|
3' region variant in the fibrinogen gamma chain gene that shifts the gamma/ga...
|
Coagulation & Clotting Factors
|
|
Strong
|
|
rs2317676
|
ITGB3
|
3' UTR variant in the platelet glycoprotein IIIa gene (ITGB3/GPIIIa) that dis...
|
Von Willebrand & Anticoagulant Proteins
|
|
Moderate
|
|
rs35929607
|
STK39
|
Intronic variant in the SPAK kinase gene that has been studied for associatio...
|
Blood Pressure & Hypertension
|
|
Emerging
|
|
rs3733585
|
SLC2A9
|
Intronic SLC2A9 variant (coding-strand T/C) within the major renal urate tran...
|
Uric Acid & Kidney Function
|
|
Emerging
|
|
rs397508072
|
KCNQ1
Q356X
|
Nonsense mutation in the cardiac IKs potassium channel causing premature prot...
|
Arrhythmia & Heart Rhythm
|
|
Established
|
|
rs4253623
|
PPARA
|
Intronic PPARA variant whose minor G allele has been associated with modest m...
|
Atherogenic Lipoproteins
|
|
Emerging
|
|
rs121918391
|
APOB
APOB Tyr1200Ter
|
Rare APOB stop-gain variant that truncates apolipoprotein B to ~27% of its fu...
|
Cholesterol & Lipoproteins
|
|
Strong
|
|
rs12721627
|
CYP3A4
*16
|
Missense variant reducing CYP3A4 enzyme activity by 50–74% depending on subst...
|
Pharmacogenomics
|
|
Moderate
|
|
rs1600482909
|
JPH2
Ser101Arg
|
Rare pathogenic missense variant in junctophilin-2 that disrupts T-tubule/sar...
|
Cardiomyopathy & Structural Heart
|
|
Strong
|
|
rs17222814
|
ALOX5AP
SG13S114 (HapB tag)
|
Intronic ALOX5AP variant tagging the HapB risk haplotype; the A allele marks ...
|
Vascular Inflammation & Remodeling
|
|
Moderate
|
|
rs174546
|
FADS1
|
3'UTR regulatory variant in FADS1 that disrupts a miR-149-5p binding site, re...
|
Triglycerides & Fatty Acids
|
|
Strong
|
|
rs17465637
|
MIA3
|
Intronic variant in MIA3/TANGO1 affecting collagen secretion and vascular smo...
|
Coronary Artery Disease & Atherosclerosis
|
|
Strong
|
|
rs267607326
|
VWF
Y1146C
|
Pathogenic missense variant in the VWF D3 domain causing von Willebrand disea...
|
Von Willebrand & Anticoagulant Proteins
|
|
Established
|
|
rs2731672
|
F12
|
Regulatory tag variant in the Factor XII locus associated with plasma FXII ac...
|
Coagulation & Clotting Factors
|
|
Strong
|
|
rs3733590
|
SLC2A9
|
Intronic SLC2A9 variant tagging the GLUT9 urate-transport locus; the C allele...
|
Uric Acid & Kidney Function
|
|
Emerging
|
|
rs3754777
|
STK39
|
Intronic STK39 variant that increases SPAK kinase expression, enhancing phosp...
|
Blood Pressure & Hypertension
|
|
Moderate
|
|
rs397508075
|
KCNQ1
KCNQ1 Long QT Type 1 Variant 3
|
Pathogenic nonsense variant (Q359X) in KCNQ1 that truncates the IKs potassium...
|
Arrhythmia & Heart Rhythm
|
|
Established
|
|
rs505151
|
PCSK9
E670G
|
Common missense variant in PCSK9 exon 12 where the rare G allele raises LDL c...
|
Atherogenic Lipoproteins
|
|
Moderate
|
|
rs6013897
|
CYP24A1
|
Near-gene regulatory variant affecting vitamin D 24-hydroxylase expression — ...
|
Vitamin D Metabolism
|
|
Strong
|
|
rs11558471
|
SLC30A8
SLC30A8 Zinc Transport Depth Variant
|
3-prime UTR variant in the SLC30A8 zinc transporter gene that alters ZnT8 mRN...
|
Blood Sugar & Diabetes
|
|
Strong
|
|
rs12447924
|
CETP
|
Upstream promoter variant in CETP that tags the HDL-raising haplotype block —...
|
Cholesterol & Lipoproteins
|
|
Moderate
|
|
rs1524107
|
IL6
|
Intronic IL6 variant tagging a low-producing haplotype — the T allele is prot...
|
Longevity & Aging
|
|
Moderate
|
|
rs17222842
|
ALOX5AP
ALOX5AP variant (SG13S32)
|
Intronic ALOX5AP haplotype tag; the common G allele marks the HapB cardiovasc...
|
Vascular Inflammation & Remodeling
|
|
Moderate
|
|
rs174547
|
FADS1
|
Omega-3 fatty acid conversion efficiency - affects ability to make EPA/DHA fr...
|
Triglycerides & Fatty Acids
|
|
Strong
|
|
rs17514846
|
FURIN
|
Intronic regulatory variant modulating FURIN expression via allele-specific D...
|
Coronary Artery Disease & Atherosclerosis
|
|
Strong
|
|
rs187830361
|
MYBPC3
Trp792Arg (W792R)
|
Ultra-rare pathogenic missense variant in the C6 fibronectin domain of cardia...
|
Cardiomyopathy & Structural Heart
|
|
Strong
|
|
rs228921
|
TMPRSS6
TMPRSS6 iron regulation variant
|
Upstream regulatory variant near TMPRSS6 that independently lowers hemoglobin...
|
Iron & Mineral Transport
|
|
Strong
|
|
rs267607352
|
VWF
W1745C
|
Missense variant in the VWF A3 collagen-binding domain causing isolated colla...
|
Von Willebrand & Anticoagulant Proteins
|
|
Strong
|
|
rs3733591
|
SLC2A9
Arg265His
|
Missense variant in the major renal urate transporter; the Arg265 (C) allele ...
|
Uric Acid & Kidney Function
|
|
Strong
|
|
rs3755351
|
ADD2
|
Intronic variant in beta-adducin modulating renal Na+/K+-ATPase trafficking a...
|
Blood Pressure & Hypertension
|
|
Emerging
|
|
rs397508077
|
KCNQ1
Long QT Type 1 Variant 4 (c.1124_1127del)
|
Pathogenic 4bp frameshift deletion in KCNQ1 that eliminates the IKs potassium...
|
Arrhythmia & Heart Rhythm
|
|
Established
|
|
rs4220
|
FGB
Arg448Lys (R448K)
|
Missense variant in the fibrinogen beta chain that elevates circulating fibri...
|
Coagulation & Clotting Factors
|
|
Moderate
|
|
rs5128
|
APOC3
3238C>G (SstI)
|
Regulates triglyceride metabolism through effects on APOC3 expression in the ...
|
Atherogenic Lipoproteins
|
|
Strong
|
|
rs58542926
|
TM6SF2
E167K
|
Lipid transport variant that impairs VLDL secretion, creating a paradoxical t...
|
Liver Fat
|
|
Strong
|
|
rs1138272
|
GSTP1
Ala114Val
|
Second functional variant in glutathione S-transferase Pi 1, reducing enzyme ...
|
Methylation & Detox
|
|
Moderate
|
|
rs1169288
|
HNF1A
HNF1A Ile27Leu
|
Common coding variant in the HNF1A transcription factor dimerization domain t...
|
Blood Sugar & Diabetes
|
|
Strong
|
|
rs12686004
|
ABCA1
|
Intronic ABCA1 variant associated with population differences in HDL choleste...
|
Cholesterol & Lipoproteins
|
|
Emerging
|
|
rs16847897
|
TERC
|
Regulatory variant at the TERC locus associated with shorter telomeres and ac...
|
Longevity & Aging
|
|
Strong
|
|
rs174548
|
FADS1
|
Intronic regulatory variant in FADS1 that reduces delta-5 desaturase expressi...
|
Triglycerides & Fatty Acids
|
|
Strong
|
|
rs17576
|
MMP9
MMP9 Q279R
|
Missense variant in the MMP9 fibronectin type II domain affecting matrix meta...
|
Coronary Artery Disease & Atherosclerosis
|
|
Moderate
|
|
rs17697419
|
VEGFC
|
Intronic variant in the primary lymphangiogenesis growth factor gene; the min...
|
Vascular Inflammation & Remodeling
|
|
Moderate
|
|
rs193922239
|
FBN1
|
Pathogenic missense variant in fibrillin-1 replacing glycine 2627 with argini...
|
Cardiomyopathy & Structural Heart
|
|
Strong
|
|
rs2413450
|
TMPRSS6
TMPRSS6 iron regulation variant
|
Intronic TMPRSS6 variant associated with lower MCV, MCH, and hemoglobin level...
|
Iron & Mineral Transport
|
|
Strong
|
|
rs267607353
|
VWF
S1783A
|
Rare pathogenic missense variant in the VWF A3 collagen-binding domain causin...
|
Von Willebrand & Anticoagulant Proteins
|
|
Strong
|
|
rs28362491
|
NFKB1
-94ins/delATTG
|
Promoter insertion/deletion polymorphism reducing NF-κB p50 transcription and...
|
Innate Immunity & Infection Defense
|
|
Strong
|
|
rs33912345
|
SIX6
Asn141His
|
Affects optic nerve development and retinal ganglion cell survival, strongly ...
|
Skin & Eyes
|
|
Strong
|
|
rs3825016
|
SLC22A12
|
Synonymous coding variant in the URAT1 renal urate transporter; the C allele ...
|
Uric Acid & Kidney Function
|
|
Moderate
|
|
rs3865418
|
NEDD4L
|
Intronic NEDD4L variant that tags reduced ubiquitin-ligase activity toward th...
|
Blood Pressure & Hypertension
|
|
Moderate
|
|
rs422187
|
F9
Intronic F9 variant
|
Intronic variant in the Factor IX gene in near-perfect linkage disequilibrium...
|
Coagulation & Clotting Factors
|
|
Moderate
|
|
rs5174
|
LRP8
LRP8 R952Q
|
Missense variant in LRP8 (ApoER2) replacing arginine with glutamine at positi...
|
Atherogenic Lipoproteins
|
|
Moderate
|
|
rs57875989
|
PER3
PER3 VNTR (4/5 repeat)
|
Coding VNTR in exon 18 of the circadian clock gene PER3; 4-repeat vs 5-repeat...
|
Arrhythmia & Heart Rhythm
|
|
Moderate
|
|
rs613084
|
CPT1A
CPT1A carnitine shuttle variant
|
Intronic variant that influences CPT1A expression and fatty acid oxidation ca...
|
Liver Fat
|
|
Moderate
|
|
rs12713559
|
APOB
APOB R3558C
|
Rare APOB missense variant reducing LDL-receptor binding affinity by ~40-50%,...
|
Cholesterol & Lipoproteins
|
|
Moderate
|
|
rs174553
|
FADS1
|
Intronic variant in the FADS1 gene cluster that reduces delta-5 desaturase ac...
|
Triglycerides & Fatty Acids
|
|
Strong
|
|
rs17697515
|
VEGFC
|
Intronic VEGFC variant independently associated with reduced diabetic retinop...
|
Vascular Inflammation & Remodeling
|
|
Moderate
|
|
rs1805762
|
M6PR
|
Intronic M6PR variant associated with modest hypertension risk in East Asian ...
|
Coronary Artery Disease & Atherosclerosis
|
|
Emerging
|
|
rs193922385
|
MYBPC3
Arg177Cys
|
A rare missense variant in the C1 immunoglobulin domain of cardiac myosin-bin...
|
Cardiomyopathy & Structural Heart
|
|
Emerging
|
|
rs2229616
|
MC4R
V103I
|
Missense variant in MC4R converting valine to isoleucine at position 103; the...
|
Appetite & Obesity
|
|
Strong
|
|
rs28647808
|
ADAMTS13
Pro618Ala
|
Missense variant in the spacer domain of ADAMTS13 that reduces VWF-cleaving p...
|
Von Willebrand & Anticoagulant Proteins
|
|
Moderate
|
|
rs3910053
|
NR3C2
|
Intronic NR3C2 variant associated with salt sensitivity of blood pressure and...
|
Blood Pressure & Hypertension
|
|
Emerging
|
|
rs4253238
|
KLKB1
KLKB1 intronic variant
|
Intronic KLKB1 variant whose T allele elevates plasma kallikrein enzymatic ac...
|
Coagulation & Clotting Factors
|
|
Moderate
|
|
rs4293393
|
UMOD
|
UMOD promoter variant affecting uromodulin expression, linked to CKD, salt-se...
|
Uric Acid & Kidney Function
|
|
Established
|
|
rs5177
|
LRP8
LRP8 3'UTR variant
|
3'UTR variant in LRP8 (ApoER2) that affects mRNA stability and forms part of ...
|
Atherogenic Lipoproteins
|
|
Moderate
|
|
rs6997709
|
KCNK9
|
Intergenic variant upstream of KCNK9 (TASK3 potassium channel) associated wit...
|
Arrhythmia & Heart Rhythm
|
|
Moderate
|
|
rs11708067
|
ADCY5
ADCY5 Glucose Signaling Variant
|
Intronic regulatory variant that reduces ADCY5 expression in pancreatic islet...
|
Blood Sugar & Diabetes
|
|
Strong
|
|
rs1341162
|
CYP2C8
|
Intronic CYP2C8 haplotype-tagging variant linked to altered drug metabolism c...
|
Pharmacogenomics
|
|
Moderate
|
|
rs137943601
|
LDLR
LDLR E408* (Glu408Ter)
|
Nonsense mutation in the LDLR gene creating a premature stop codon at positio...
|
Cholesterol & Lipoproteins
|
|
Strong
|
|
rs174561
|
FADS1
|
Intronic variant in the FADS1 gene cluster that tags a haplotype block contro...
|
Triglycerides & Fatty Acids
|
|
Strong
|
|
rs1799752
|
ACE
I/D (Alu insertion/deletion)
|
The causal ACE insertion/deletion structural variant — presence or absence of...
|
Fitness & Body
|
|
Strong
|
|
rs1799987
|
CCR5
CCR5 Promoter -2459A>G
|
Regulatory variant in the CCR5 promoter that reduces CCR5 expression by ~45%;...
|
Vascular Inflammation & Remodeling
|
|
Moderate
|
|
rs193922680
|
ACTC1
ACTC1 p.Glu101Lys
|
Pathogenic missense variant in cardiac alpha-actin that causes hypertrophic c...
|
Cardiomyopathy & Structural Heart
|
|
Established
|
|
rs20455
|
KIF6
Trp719Arg
|
Missense variant in kinesin family member 6; the Arg allele was associated wi...
|
Coronary Artery Disease & Atherosclerosis
|
|
Moderate
|
|
rs234709
|
CBS
|
Intronic CBS variant that tags the CBS locus in GWAS studies; associated with...
|
Vitamins & Nutrient Absorption
|
|
Moderate
|
|
rs28673647
|
ADAMTS13
|
Intronic ADAMTS13 variant modulating plasma ADAMTS13 levels; the G allele con...
|
Von Willebrand & Anticoagulant Proteins
|
|
Strong
|
|
rs3918226
|
NOS3
|
NOS3 promoter variant that reduces eNOS expression and increases hypertension...
|
Blood Pressure & Hypertension
|
|
Strong
|
|
rs4473653
|
SLC2A9
|
Intronic SLC2A9 variant in a third independent haplotype block within the GLU...
|
Uric Acid & Kidney Function
|
|
Moderate
|
|
rs55714927
|
ASGR1
ASGR1 K89K
|
Synonymous coding variant (Lys89Lys) in the asialoglycoprotein receptor 1 gen...
|
Atherogenic Lipoproteins
|
|
Strong
|
|
rs5985
|
F13A1
Val34Leu
|
Missense variant in Factor XIII A subunit; the Leu34 allele accelerates throm...
|
Coagulation & Clotting Factors
|
|
Strong
|
|
rs7940244
|
NADSYN1
Near DHCR7
|
Intronic NADSYN1 variant in the DHCR7/NADSYN1 vitamin D locus; T allele tags ...
|
Vitamin D Metabolism
|
|
Strong
|
|
rs11627387
|
MTHFD1
|
Intronic variant in the cytoplasmic trifunctional folate enzyme MTHFD1, assoc...
|
Methylation & Detox
|
|
Moderate
|
|
rs1341164
|
CYP2C8
|
Intronic CYP2C8 variant tagging a haplotype associated with altered taxane dr...
|
Pharmacogenomics
|
|
Emerging
|
|
rs1457043
|
CYP7A1
|
Intronic variant in CYP7A1 that tags a haplotype block influencing cholestero...
|
Cholesterol & Lipoproteins
|
|
Moderate
|
|
rs174568
|
FADS2
FADS2 C>T (delta-6 desaturase)
|
Intronic regulatory variant in FADS2 encoding delta-6 desaturase, the rate-li...
|
Triglycerides & Fatty Acids
|
|
Moderate
|
|
rs1800471
|
TGFB1
R25P (Arg25Pro)
|
Signal-peptide missense variant altering TGF-β1 secretion levels, associated ...
|
Vascular Inflammation & Remodeling
|
|
Moderate
|
|
rs199474703
|
MYL3
Arg94His (R94H)
|
Rare pathogenic missense variant in the myosin essential light chain causing ...
|
Cardiomyopathy & Structural Heart
|
|
Strong
|
|
rs2231137
|
ABCG2
ABCG2 V12M (Val12Met)
|
Missense variant in the ABCG2 transporter that impairs membrane localization ...
|
Coronary Artery Disease & Atherosclerosis
|
|
Moderate
|
|
rs33978901
|
VWF
p.Arg924Gln
|
VWF missense variant (R924Q) that reduces von Willebrand factor and Factor VI...
|
Von Willebrand & Anticoagulant Proteins
|
|
Moderate
|
|
rs3889728
|
AGT
AGT Intronic Variant
|
Intronic variant in the angiotensinogen (AGT) gene; the T allele has been inc...
|
Reproductive Hormones
|
|
Emerging
|
|
rs4236601
|
CAV1
|
Intergenic variant near caveolin genes affecting primary open-angle glaucoma ...
|
Skin & Eyes
|
|
Strong
|
|
rs4762
|
AGT
T174M
|
Missense variant in angiotensinogen that increases AGT protein levels and rai...
|
Blood Pressure & Hypertension
|
|
Moderate
|
|
rs4820268
|
TMPRSS6
TMPRSS6 D512E
|
TMPRSS6 missense variant affecting matriptase-2 activity; A allele (Asp512Glu...
|
Iron & Mineral Transport
|
|
Strong
|
|
rs5925
|
LDLR
LDLR Expression Co-variant
|
Synonymous variant in LDLR exon 13 that modulates mRNA splicing efficiency in...
|
Atherogenic Lipoproteins
|
|
Moderate
|
|
rs6048
|
F9
Factor IX Malmö
|
Common missense variant in the X-linked coagulation factor IX gene; the G all...
|
Coagulation & Clotting Factors
|
|
Moderate
|
|
rs7944926
|
DHCR7
|
Near-gene intronic variant in the DHCR7/NADSYN1 locus on chromosome 11 that t...
|
Vitamin D Metabolism
|
|
Strong
|
|
rs12598836
|
HMOX2
|
Intronic variant near heme oxygenase 2 (HMOX2) associated with migraine-with-...
|
Neurology & Cognition
|
|
Moderate
|
|
rs174572
|
FADS2
|
Intronic variant in FADS2 that reduces delta-6 desaturase activity, impairing...
|
Triglycerides & Fatty Acids
|
|
Strong
|
|
rs1800206
|
PPARA
Leu162Val (L162V)
|
Missense variant in PPARA that reduces receptor transcriptional activity, ele...
|
Fitness & Body
|
|
Moderate
|
|
rs1800775
|
CETP
-629C>A
|
CETP promoter variant that reduces CETP expression via Sp1/Sp3 repression, ra...
|
Cholesterol & Lipoproteins
|
|
Strong
|
|
rs1800872
|
IL10
-592 C>A
|
Promoter variant affecting IL-10 production — a key anti-inflammatory cytokin...
|
Vascular Inflammation & Remodeling
|
|
Strong
|
|
rs1935949
|
FOXO3
|
Second independent FOXO3 longevity signal tagging a distinct intronic haploty...
|
Longevity & Aging
|
|
Moderate
|
|
rs201457110
|
DCHS1
|
Rare pathogenic missense variant in DCHS1 (R2513H) causing mitral valve prola...
|
Cardiomyopathy & Structural Heart
|
|
Moderate
|
|
rs2241766
|
ADIPOQ
T45G
|
Synonymous exon 2 variant in the adiponectin gene that affects mRNA stability...
|
Coronary Artery Disease & Atherosclerosis
|
|
Moderate
|
|
rs369504169
|
PROC
p.Arg42His (c.125G>A)
|
Rare missense variant in the PROC gene encoding protein C; the A allele subst...
|
Von Willebrand & Anticoagulant Proteins
|
|
Strong
|
|
rs4580649
|
SLC2A9
SLC2A9 rs4580649
|
Intronic variant in the major renal urate transporter SLC2A9 (GLUT9); the A a...
|
Uric Acid & Kidney Function
|
|
Moderate
|
|
rs482843
|
CTH
|
Intronic CTH variant where GG homozygotes show significantly elevated preecla...
|
Blood Pressure & Hypertension
|
|
Moderate
|
|
rs5756504
|
TMPRSS6
TMPRSS6 variant
|
Intronic TMPRSS6 variant associated with hemoglobin levels and erythrocyte pa...
|
Iron & Mineral Transport
|
|
Moderate
|
|
rs6008845
|
PPARA
PPARA intronic C/T
|
Regulatory PPARA variant where TT homozygotes with type 2 diabetes experience...
|
Atherogenic Lipoproteins
|
|
Strong
|
|
rs6050
|
FGA
Thr312Ala
|
Missense variant in the fibrinogen alpha chain (FGA) that substitutes alanine...
|
Coagulation & Clotting Factors
|
|
Strong
|
|
rs174575
|
FADS2
|
Intronic variant in FADS2 that reduces delta-6 desaturase activity, impairing...
|
Triglycerides & Fatty Acids
|
|
Strong
|
|
rs1799941
|
SHBG
|
Promoter region variant affecting sex hormone-binding globulin levels, with t...
|
Hormones & Sleep
|
|
Strong
|
|
rs1800764
|
ACE
Promoter T>C
|
Upstream promoter-region ACE variant on a separate LD block from the I/D poly...
|
Fitness & Body
|
|
Moderate
|
|
rs1800947
|
CRP
+1059G>C
|
Synonymous exon 2 variant that influences baseline C-reactive protein express...
|
Vascular Inflammation & Remodeling
|
|
Strong
|
|
rs185392267
|
PCSK9
Arg96Cys
|
Gain-of-function missense variant in PCSK9 that increases intracellular LDL r...
|
Cholesterol & Lipoproteins
|
|
Strong
|
|
rs2118181
|
FBN1
|
Intronic FBN1 variant associated with elevated thoracic aortic dissection ris...
|
Cardiomyopathy & Structural Heart
|
|
Emerging
|
|
rs2298566
|
SNX19
|
Missense variant in sorting nexin 19 that alters endolysosomal positioning at...
|
Coronary Artery Disease & Atherosclerosis
|
|
Moderate
|
|
rs387906674
|
PROS1
R355C
|
Rare pathogenic missense variant in protein S causing hereditary type III pro...
|
Von Willebrand & Anticoagulant Proteins
|
|
Strong
|
|
rs475688
|
SLC22A12
|
Intronic regulatory variant in the URAT1 renal urate transporter gene; the T ...
|
Uric Acid & Kidney Function
|
|
Strong
|
|
rs4961
|
ADD1
Gly460Trp
|
Alpha-adducin missense variant that increases renal tubular sodium reabsorpti...
|
Blood Pressure & Hypertension
|
|
Strong
|
|
rs5756506
|
TMPRSS6
|
Intronic TMPRSS6 variant associated with hemoglobin and hematocrit levels, in...
|
Iron & Mineral Transport
|
|
Emerging
|
|
rs6063
|
FGG
Gly191Arg
|
Rare missense variant in the fibrinogen gamma chain that disrupts fibrin poly...
|
Coagulation & Clotting Factors
|
|
Moderate
|
|
rs6511720
|
LDLR
Intron 1
|
Common regulatory variant in the LDL receptor gene affecting LDLR expression,...
|
Atherogenic Lipoproteins
|
|
Strong
|
|
rs13266634
|
SLC30A8
Arg325Trp (C>T)
|
Zinc transporter 8 variant affecting zinc loading into insulin granules, infl...
|
Blood Sugar & Diabetes
|
|
Established
|
|
rs174616
|
FADS2
FADS2 Haplotype Block Variant
|
Intronic FADS2 variant tagging the FADS1/FADS2 haplotype block; A allele carr...
|
Triglycerides & Fatty Acids
|
|
Strong
|
|
rs1800624
|
AGER
-374T/A
|
Promoter variant in the AGER gene that increases RAGE transcription approxima...
|
Hormones & Sleep
|
|
Moderate
|
|
rs1800795
|
IL6
-174G/C
|
Promoter variant controlling interleukin-6 expression — affects inflammation,...
|
Fitness & Body
|
|
Strong
|
|
rs1831281
|
CFH
|
Intronic CFH variant that tags the complement-risk haplotype; the C allele (c...
|
Vascular Inflammation & Remodeling
|
|
Moderate
|
|
rs2228314
|
SREBF2
SREBF2 G1784C
|
Missense variant in the master cholesterol transcription factor SREBP-2 that ...
|
Cholesterol & Lipoproteins
|
|
Moderate
|
|
rs2361502
|
MROH2A
|
Intronic variant adjacent to the UGT1A gene cluster; C allele tags elevated s...
|
Metabolic Enzymes & Rare Disorders
|
|
Moderate
|
|
rs267606908
|
MYH7
D906G
|
Pathogenic beta-myosin heavy chain missense variant causing a hypercontractil...
|
Cardiomyopathy & Structural Heart
|
|
Established
|
|
rs2943634
|
IRS1
|
Intergenic variant near IRS1 at 2q36.3 associated with ischemic stroke risk, ...
|
Coronary Artery Disease & Atherosclerosis
|
|
Moderate
|
|
rs387906675
|
PROS1
Y234C
|
Pathogenic missense variant in the vitamin K-dependent anticoagulant gene PRO...
|
Von Willebrand & Anticoagulant Proteins
|
|
Established
|
|
rs5051
|
AGT
G-6A
|
Promoter variant that increases angiotensinogen gene transcription, raising p...
|
Blood Pressure & Hypertension
|
|
Strong
|
|
rs505802
|
SLC22A12
|
Upstream regulatory variant in the URAT1 urate reabsorption transporter gene;...
|
Uric Acid & Kidney Function
|
|
Established
|
|
rs662799
|
APOA5
-1131T>C
|
Promoter variant that reduces APOA5 expression, impairing lipoprotein lipase ...
|
Atherogenic Lipoproteins
|
|
Strong
|
|
rs7385804
|
TFR2
|
Intronic variant in transferrin receptor 2 that tags altered TFR2 expression ...
|
Iron & Mineral Transport
|
|
Strong
|
|
rs780094
|
GCKR
|
Intronic GCKR variant in strong LD with the coding P446L substitution (rs1260...
|
Liver Fat
|
|
Strong
|
|
rs16928751
|
ADIPOR2
ADIPOR2 CVD co-association variant
|
Synonymous coding variant in ADIPOR2 (Q265Q) that was co-associated with card...
|
Fat Storage & Energy
|
|
Emerging
|
|
rs17482753
|
LPL
LPL G>T (Intergenic Variant)
|
Intergenic variant near the lipoprotein lipase gene on 8p21.3 with an indepen...
|
Triglycerides & Fatty Acids
|
|
Moderate
|
|
rs1800625
|
AGER
AGER -429T>C
|
Promoter variant at position -429 in the AGER gene that increases RAGE transc...
|
Hormones & Sleep
|
|
Moderate
|
|
rs1801252
|
ADRB1
Ser49Gly
|
Beta-1 adrenergic receptor variant at position 49 affecting receptor downregu...
|
Fitness & Body
|
|
Strong
|
|
rs2069837
|
IL6
|
Intronic IL6 enhancer variant that regulates the anti-inflammatory gene GPNMB...
|
Longevity & Aging
|
|
Moderate
|
|
rs2234714
|
ABCG1
ABCG1 promoter variant
|
Intronic ABCG1 variant near the promoter region; homozygous carriers of the m...
|
Cholesterol & Lipoproteins
|
|
Emerging
|
|
rs30021
|
SNX24
VEGFA Vascular Growth Co-variant
|
Intronic variant in SNX24 (sorting nexin 24) with roles in vascular endotheli...
|
Coronary Artery Disease & Atherosclerosis
|
|
Emerging
|
|
rs36211723
|
MYBPC3
Asp770Asn (c.2308G>A)
|
Rare pathogenic missense variant at the last nucleotide of MYBPC3 exon 23, ca...
|
Cardiomyopathy & Structural Heart
|
|
Strong
|
|
rs41276738
|
VWF
p.Arg854Gln (R854Q) type 2N
|
Missense variant in the VWF D' domain that abolishes high-affinity Factor VII...
|
Von Willebrand & Anticoagulant Proteins
|
|
Established
|
|
rs5068
|
NPPA
|
3'UTR variant that disrupts miR-425 binding, increasing atrial natriuretic pe...
|
Blood Pressure & Hypertension
|
|
Strong
|
|
rs6742078
|
UGT1A10
|
Intronic variant in the UGT1A gene cluster (chromosome 2q37) strongly associa...
|
Uric Acid & Kidney Function
|
|
Strong
|
|
rs688
|
LDLR
Asn591Asn (c.1773C>T)
|
Synonymous LDLR variant that disrupts exon 12 splicing, reduces LDL receptor ...
|
Atherogenic Lipoproteins
|
|
Strong
|
|
rs855791
|
TMPRSS6
Ala736Val
|
Master regulator of iron absorption via hepcidin control — the strongest comm...
|
Iron & Mineral Transport
|
|
Established
|
|
rs1532268
|
MTRR
MTRR S175L
|
Missense variant in methionine synthase reductase that raises homocysteine wh...
|
Methylation & Detox
|
|
Moderate
|
|
rs1801253
|
ADRB1
Arg389Gly
|
Beta-1 adrenergic receptor variant where Arg389 produces higher basal activit...
|
Fitness & Body
|
|
Strong
|
|
rs1927911
|
TLR4
|
Intronic TLR4 variant in the innate immune receptor gene; the A allele associ...
|
Vascular Inflammation & Remodeling
|
|
Moderate
|
|
rs2153960
|
FOXO3
|
Intronic FOXO3 tag SNP whose A allele associates with higher circulating IGF-...
|
Longevity & Aging
|
|
Moderate
|
|
rs2249891
|
ABCA1
|
Intronic ABCA1 variant associated with lower HDL-cholesterol susceptibility a...
|
Cholesterol & Lipoproteins
|
|
Moderate
|
|
rs3184504
|
SH2B3
R262W
|
Pleiotropic missense variant reducing SH2B3 inhibitory function, increasing b...
|
Coronary Artery Disease & Atherosclerosis
|
|
Strong
|
|
rs371898076
|
MYH7
Arg663His (R663H)
|
Pathogenic missense variant in the myosin motor domain causing hypertrophic c...
|
Cardiomyopathy & Structural Heart
|
|
Strong
|
|
rs5186
|
AGTR1
A1166C
|
3' UTR variant in angiotensin II type 1 receptor affecting blood pressure reg...
|
Blood Pressure & Hypertension
|
|
Moderate
|
|
rs61748497
|
VWF
C1060R
|
Pathogenic missense in the VWF D3 domain that abolishes factor VIII binding; ...
|
Von Willebrand & Anticoagulant Proteins
|
|
Established
|
|
rs693
|
APOB
XbaI (C/T)
|
Silent variant affecting LDL particle number and lipid metabolism; A allele c...
|
Atherogenic Lipoproteins
|
|
Strong
|
|
rs17300539
|
ADIPOQ
-11391G>A
|
Promoter variant affecting adiponectin secretion and metabolic syndrome risk
|
Fat Storage & Energy
|
|
Strong
|
|
rs200330818
|
GDF2
|
Rare missense variant in BMP9/GDF2 that impairs processing of the mature BMP9...
|
Vascular Inflammation & Remodeling
|
|
Moderate
|
|
rs2575876
|
ABCA1
|
Intronic ABCA1 variant associated with HDL-C levels under a recessive model; ...
|
Cholesterol & Lipoproteins
|
|
Moderate
|
|
rs340875
|
PROX1
|
Intronic variant in PROX1, the master transcription factor for lymphatic endo...
|
Coronary Artery Disease & Atherosclerosis
|
|
Moderate
|
|
rs375882485
|
MYBPC3
Arg502Trp
|
Pathogenic missense variant in the C3 domain of cardiac myosin-binding protei...
|
Cardiomyopathy & Structural Heart
|
|
Established
|
|
rs5335
|
EDNRA
|
3' UTR variant in the endothelin receptor type A gene associated with ambulat...
|
Blood Pressure & Hypertension
|
|
Moderate
|
|
rs61750579
|
VWF
V1607D
|
Pathogenic missense variant in von Willebrand factor A2 domain adjacent to th...
|
Von Willebrand & Anticoagulant Proteins
|
|
Strong
|
|
rs6849729
|
SLC2A9
|
Intronic SLC2A9 variant 70 bp from rs6815001 tagging the same renal urate-cle...
|
Uric Acid & Kidney Function
|
|
Emerging
|
|
rs708272
|
CETP
TaqIB
|
Influences HDL cholesterol levels and particle size through effects on choles...
|
Atherogenic Lipoproteins
|
|
Strong
|
|
rs1797912
|
PPARG
PPARG intronic haplotype variant
|
Intronic PPARG variant in the same haplotype block as rs1175543; the C allele...
|
Fat Storage & Energy
|
|
Emerging
|
|
rs1815739
|
ACTN3
R577X
|
Determines presence of alpha-actinin-3 protein in fast-twitch muscle fibers, ...
|
Fitness & Body
|
|
Strong
|
|
rs2000813
|
LIPG
|
Missense variant in endothelial lipase that tags a regulatory haplotype assoc...
|
Triglycerides & Fatty Acids
|
|
Moderate
|
|
rs2237583
|
PON1
PON1 intron variant
|
Intronic PON1 variant that modulates arylesterase activity of the HDL-bound a...
|
Vascular Inflammation & Remodeling
|
|
Moderate
|
|
rs2253310
|
FOXO3
|
Intronic FOXO3 longevity variant; C allele (minor in East Asians) associated ...
|
Longevity & Aging
|
|
Moderate
|
|
rs2853579
|
ABCA1
|
Synonymous coding variant in ABCA1 that tags a regulatory element influencing...
|
Cholesterol & Lipoproteins
|
|
Strong
|
|
rs28929474
|
SERPINA1
Z allele (E342K)
|
Most common alpha-1 antitrypsin deficiency variant causing protein misfolding...
|
Metabolic Enzymes & Rare Disorders
|
|
Established
|
|
rs35257264
|
ST3GAL4
|
Intronic variant near ST3GAL4 that modulates VWF and Factor VIII sialylation,...
|
Coronary Artery Disease & Atherosclerosis
|
|
Strong
|
|
rs3900940
|
MYH15
T1105A
|
Missense variant in MYH15 encoding a Thr1105Ala substitution in myosin heavy ...
|
Cardiomyopathy & Structural Heart
|
|
Emerging
|
|
rs549476
|
NEDD4L
|
Intronic NEDD4L variant influencing ubiquitin ligase isoform expression and s...
|
Blood Pressure & Hypertension
|
|
Moderate
|
|
rs61750581
|
VWF
S1613P
|
A2 domain missense variant in von Willebrand factor associated with type 2A v...
|
Von Willebrand & Anticoagulant Proteins
|
|
Moderate
|
|
rs6852441
|
SLC2A9
|
Intronic SLC2A9 variant tagging a urate-transport regulatory haplotype; the p...
|
Uric Acid & Kidney Function
|
|
Moderate
|
|
rs730882094
|
LDLR
Asn316Ser (N316S)
|
Rare likely-pathogenic missense variant in the LDLR EGF-like repeat domain ca...
|
Atherogenic Lipoproteins
|
|
Strong
|
|
rs1537373
|
CDKN2B-AS1
ANRIL T2D/Cardiovascular Variant
|
Regulatory intronic variant within ANRIL (CDKN2B-AS1) at the 9p21.3 locus; th...
|
Blood Sugar & Diabetes
|
|
Strong
|
|
rs2010963
|
VEGFA
G-634C (+405G>C)
|
Promoter variant affecting VEGF-A expression and angiogenesis, influencing mu...
|
Fitness & Body
|
|
Strong
|
|
rs2072114
|
FADS2
FADS2 Intron 1 Variant
|
Intronic FADS2 haplotype tag SNP — the G allele is linked to altered delta-6 ...
|
Triglycerides & Fatty Acids
|
|
Moderate
|
|
rs2881766
|
ESR1
ESR1 intron variant
|
Intronic variant in estrogen receptor alpha that alters ESR1 expression and h...
|
Vascular Inflammation & Remodeling
|
|
Moderate
|
|
rs28942083
|
LDLR
Cys667Tyr
|
Pathogenic LDLR missense variant abolishing LDL receptor surface expression, ...
|
Cholesterol & Lipoproteins
|
|
Established
|
|
rs3825942
|
LOXL1
G153D (Gly153Asp)
|
Missense variant in the elastin-crosslinking enzyme LOXL1; the common G allel...
|
Coronary Artery Disease & Atherosclerosis
|
|
Strong
|
|
rs396514912
|
OBSCN
Protein-truncating variant
|
Protein-truncating frameshift deletion in obscurin; homozygous or compound he...
|
Cardiomyopathy & Structural Heart
|
|
Moderate
|
|
rs61750584
|
VWF
I1628T
|
Missense variant in the VWF A2 domain that destabilizes the protein and incre...
|
Von Willebrand & Anticoagulant Proteins
|
|
Established
|
|
rs6841581
|
EDNRA
|
Regulatory variant upstream of the endothelin receptor type A gene that reduc...
|
Blood Pressure & Hypertension
|
|
Strong
|
|
rs730882105
|
LDLR
p.Val524Met
|
Rare LDLR missense variant (c.1570G>A, p.Val524Met) associated with familial ...
|
Atherogenic Lipoproteins
|
|
Moderate
|
|
rs1934953
|
CYP2C8
|
Intronic CYP2C8 variant linked to epoxygenase pathway activity, hypertension ...
|
Pharmacogenomics
|
|
Emerging
|
|
rs2016520
|
PPARD
+294T>C
|
Regulatory variant that increases PPARD transcription, enhancing fat oxidatio...
|
Fitness & Body
|
|
Moderate
|
|
rs2073658
|
USF1
USF1 FCHL Variant
|
Intronic USF1 variant; the T allele disrupts insulin-responsive USF1 regulati...
|
Triglycerides & Fatty Acids
|
|
Strong
|
|
rs2295080
|
MTOR
|
Promoter variant that reduces mTOR expression; the G allele lowers mTOR trans...
|
Longevity & Aging
|
|
Moderate
|
|
rs28934568
|
TGFBR2
|
Pathogenic missense variant in TGFBR2 (Leu308Pro) causing Loeys-Dietz syndrom...
|
Vascular Inflammation & Remodeling
|
|
Established
|
|
rs28942084
|
LDLR
LDLR Pro685Leu
|
Pathogenic LDLR missense variant in the EGF precursor domain causing familial...
|
Cholesterol & Lipoproteins
|
|
Established
|
|
rs3850641
|
TNFSF4
TNFSF4 (OX40L) Intron 1 Variant
|
Intronic variant in TNFSF4 (OX40 ligand) linked to a promoter haplotype that ...
|
Coronary Artery Disease & Atherosclerosis
|
|
Moderate
|
|
rs397514752
|
MYBPC3
Gly490Val
|
Ultra-rare autosomal recessive MYBPC3 missense variant; homozygotes develop s...
|
Cardiomyopathy & Structural Heart
|
|
Emerging
|
|
rs61750591
|
VWF
c.4944del
|
A frameshift deletion in VWF that truncates von Willebrand factor from positi...
|
Von Willebrand & Anticoagulant Proteins
|
|
Strong
|
|
rs7305099
|
WNK1
WNK1 intronic variant
|
Intronic WNK1 variant where the G allele is associated with increased essenti...
|
Blood Pressure & Hypertension
|
|
Moderate
|
|
rs73885316
|
APOL1
p.N264K
|
Protective missense modifier in APOL1 that abolishes G2 risk allele cytotoxic...
|
Uric Acid & Kidney Function
|
|
Strong
|
|
rs763625913
|
LDLR
Q770* (c.2308C>T)
|
Rare pathogenic nonsense variant in the LDL receptor gene that abolishes rece...
|
Atherogenic Lipoproteins
|
|
Established
|
|
rs28936687
|
ACVRL1
|
Pathogenic missense variant in ALK1 kinase domain causing hereditary hemorrha...
|
Vascular Inflammation & Remodeling
|
|
Established
|
|
rs28942085
|
LDLR
LDLR Y828C (J.D. mutation)
|
Pathogenic LDLR missense variant (p.Tyr828Cys) that traps LDL receptors outsi...
|
Cholesterol & Lipoproteins
|
|
Established
|
|
rs3918242
|
MMP9
MMP9 C-1562T
|
Promoter variant that disrupts an SP1 transcription factor binding site, incr...
|
Coronary Artery Disease & Atherosclerosis
|
|
Strong
|
|
rs397515953
|
MYBPC3
|
Rare pathogenic/likely pathogenic missense variant in the C5 immunoglobulin-l...
|
Cardiomyopathy & Structural Heart
|
|
Strong
|
|
rs41423247
|
NR3C1
BclI
|
Intronic glucocorticoid receptor variant affecting cortisol sensitivity and s...
|
Mood & Behavior
|
|
Strong
|
|
rs4845625
|
IL6R
|
Intronic IL6R variant associated with coronary artery disease risk, elevated ...
|
TNF, NF-kB & Inflammatory Cytokines
|
|
Moderate
|
|
rs61750595
|
VWF
R1659X
|
Nonsense mutation creating a premature stop codon in von Willebrand factor; h...
|
Von Willebrand & Anticoagulant Proteins
|
|
Established
|
|
rs7571842
|
SLC4A5
|
Intronic variant in the renal sodium-bicarbonate cotransporter gene SLC4A5 as...
|
Blood Pressure & Hypertension
|
|
Strong
|
|
rs182052
|
ADIPOQ
ADIPOQ promoter -10066A>G
|
Intronic/promoter-region ADIPOQ variant where the A allele reduces circulatin...
|
Fat Storage & Energy
|
|
Strong
|
|
rs1934967
|
CYP2C9
|
Intronic CYP2C9 haplotype tag associated with altered warfarin sensitivity an...
|
Pharmacogenomics
|
|
Moderate
|
|
rs2197089
|
LPL
LPL Regulatory Variant
|
Downstream regulatory variant affecting LPL expression and triglyceride clear...
|
Triglycerides & Fatty Acids
|
|
Strong
|
|
rs3846662
|
HMGCR
HMGCR Intron 13 Splice Variant
|
Intronic HMGCR variant that modulates alternative splicing of exon 13, produc...
|
Cholesterol & Lipoproteins
|
|
Moderate
|
|
rs397516127
|
MYH7
Arg663Cys (R663C)
|
Pathogenic missense variant in the beta-myosin heavy chain motor domain causi...
|
Cardiomyopathy & Structural Heart
|
|
Strong
|
|
rs4537545
|
IL6R
IL6R intron variant
|
Intronic IL6R variant in linkage disequilibrium with the functional Asp358Ala...
|
Coronary Artery Disease & Atherosclerosis
|
|
Strong
|
|
rs61750612
|
VWF
R1853X
|
Nonsense mutation creating a premature stop codon at position 1853 of von Wil...
|
Von Willebrand & Anticoagulant Proteins
|
|
Established
|
|
rs8094327
|
NEDD4L
|
Intronic NEDD4L variant tagging the haplotype block that modulates ENaC sodiu...
|
Blood Pressure & Hypertension
|
|
Moderate
|
|
rs1862513
|
RETN
-420C>G
|
Promoter variant that increases resistin expression via Sp1/Sp3 transcription...
|
Fat Storage & Energy
|
|
Moderate
|
|
rs1934980
|
CYP2C8
|
Intronic CYP2C8 variant linked to altered enzyme expression and associated wi...
|
Pharmacogenomics
|
|
Moderate
|
|
rs2070600
|
AGER
Gly82Ser
|
Missense variant in the AGER pattern-recognition receptor that reduces solubl...
|
Hormones & Sleep
|
|
Strong
|
|
rs2236212
|
ELOVL2
|
Intronic variant in ELOVL2 that reduces elongase-2 enzyme activity, impairing...
|
Triglycerides & Fatty Acids
|
|
Moderate
|
|
rs2542052
|
APOC3
|
Promoter variant that reduces APOC3 expression, associated with lower triglyc...
|
Longevity & Aging
|
|
Strong
|
|
rs28936701
|
CYP1B1
R469W
|
Pathogenic CYP1B1 missense variant (Arg469Trp) that severely reduces enzyme a...
|
Vascular Inflammation & Remodeling
|
|
Established
|
|
rs3846663
|
HMGCR
HMGCR Exon 13 Haplotype Tag
|
Intronic HMGCR variant that tags a haplotype influencing exon 13 alternative ...
|
Cholesterol & Lipoproteins
|
|
Strong
|
|
rs397516394
|
TPM1
Met281Val
|
Ultra-rare TPM1 missense variant of uncertain significance found in hypertrop...
|
Cardiomyopathy & Structural Heart
|
|
Emerging
|
|
rs4252185
|
PLG
|
Intronic PLG variant (intron 1) whose C allele is enriched in Europeans and a...
|
Innate Immunity & Infection Defense
|
|
Emerging
|
|
rs4888378
|
CFDP1
|
Intronic CFDP1 locus variant that regulates BCAR1 expression in vascular tiss...
|
Coronary Artery Disease & Atherosclerosis
|
|
Strong
|
|
rs61750630
|
VWF
C2362F
|
Pathogenic missense variant in von Willebrand factor causing intracellular re...
|
Von Willebrand & Anticoagulant Proteins
|
|
Strong
|
|
rs7679916
|
SLC2A9
|
Regulatory upstream variant in the SLC2A9 promoter region; the T allele is as...
|
Uric Acid & Kidney Function
|
|
Emerging
|
|
rs841
|
GCH1
|
Intronic/3'UTR GCH1 variant tagging reduced tetrahydrobiopterin (BH4) synthes...
|
Blood Pressure & Hypertension
|
|
Moderate
|
|
rs1799983
|
NOS3
Glu298Asp
|
Nitric oxide production - reduced activity increases cardiovascular risk and ...
|
Methylation & Detox
|
|
Established
|
|
rs2241767
|
ADIPOQ
+349A>G
|
Intronic variant in the adiponectin gene associated with lower circulating ad...
|
Fat Storage & Energy
|
|
Moderate
|
|
rs2278236
|
ANGPTL4
ANGPTL4 Intronic Variant
|
Intronic ANGPTL4 variant tagging reduced LPL inhibition; the A allele is asso...
|
Triglycerides & Fatty Acids
|
|
Strong
|
|
rs243865
|
MMP2
C-1306T
|
Promoter polymorphism that disrupts an Sp1-binding site and reduces MMP-2 enz...
|
Fitness & Body
|
|
Moderate
|
|
rs3091244
|
CRP
-286C>T>A
|
Triallelic promoter variant that strongly influences basal CRP transcription;...
|
Vascular Inflammation & Remodeling
|
|
Strong
|
|
rs377022708
|
ACAD9
Arg532Trp (R532W)
|
Pathogenic missense variant in the ACAD9 complex I assembly factor causing se...
|
Metabolic Enzymes & Rare Disorders
|
|
Strong
|
|
rs397516406
|
MYL2
G162E (Gly162Glu)
|
Pathogenic missense variant in the ventricular regulatory myosin light chain ...
|
Cardiomyopathy & Structural Heart
|
|
Strong
|
|
rs4149268
|
ABCA1
|
Intronic ABCA1 variant — the C allele tags a liver enhancer that boosts ABCA1...
|
Cholesterol & Lipoproteins
|
|
Moderate
|
|
rs4977574
|
CDKN2B-AS1
9p21.3
|
Independent 9p21.3 CAD risk signal in ANRIL; G allele elevates coronary arter...
|
Coronary Artery Disease & Atherosclerosis
|
|
Established
|
|
rs61751290
|
VWF
c.7437+1G>T
|
Splice donor variant in VWF intron 43 that destroys the canonical GT dinucleo...
|
Von Willebrand & Anticoagulant Proteins
|
|
Emerging
|
|
rs77924615
|
UMOD
PDILT-UMOD regulatory variant
|
Intronic regulatory variant physically located in PDILT that controls uromodu...
|
Uric Acid & Kidney Function
|
|
Strong
|
|
rs1800566
|
NQO1
Pro187Ser (C609T)
|
Phase II detoxification enzyme that reduces quinones and recycles CoQ10 to it...
|
Methylation & Detox
|
|
Strong
|
|
rs2234693
|
ESR1
PvuII
|
Estrogen receptor alpha intron variant affecting receptor expression and estr...
|
Hormones & Sleep
|
|
Moderate
|
|
rs2524299
|
FADS2
|
Intronic regulatory variant in FADS2 (Block 2 haplotype) that reduces basal F...
|
Triglycerides & Fatty Acids
|
|
Moderate
|
|
rs2736100
|
TERT
|
Common intron 2 variant in the telomerase gene that influences telomere lengt...
|
Longevity & Aging
|
|
Strong
|
|
rs28937900
|
FKRP
L276I
|
The most common pathogenic mutation in FKRP causing limb-girdle muscular dyst...
|
Fitness & Body
|
|
Established
|
|
rs3093059
|
CRP
-757T>C
|
Promoter variant that elevates baseline C-reactive protein levels, increasing...
|
Vascular Inflammation & Remodeling
|
|
Strong
|
|
rs397516407
|
MYL2
Glu163Ala
|
Pathogenic missense variant in the regulatory myosin light chain gene; hetero...
|
Cardiomyopathy & Structural Heart
|
|
Strong
|
|
rs4149274
|
ABCA1
|
Intronic ABCA1 variant influencing HDL-cholesterol levels through altered ABC...
|
Cholesterol & Lipoproteins
|
|
Moderate
|
|
rs501120
|
CXCL12
|
Regulatory variant ~80 kb downstream of CXCL12 (SDF-1) associated with elevat...
|
Coronary Artery Disease & Atherosclerosis
|
|
Strong
|
|
rs61753993
|
VWF
D141G
|
Missense variant in von Willebrand factor (p.Asp141Gly) associated with type ...
|
Von Willebrand & Anticoagulant Proteins
|
|
Moderate
|
|
rs2297508
|
SREBF1
SREBF1 G952G
|
SREBF1 3' UTR variant that subtly impairs SREBP-1c function, increasing risk ...
|
Fat Storage & Energy
|
|
Moderate
|
|
rs264
|
LPL
LPL Intron 6 Variant
|
Intronic LPL variant associated with altered triglyceride clearance and HDL l...
|
Triglycerides & Fatty Acids
|
|
Moderate
|
|
rs2764264
|
FOXO3
|
Intronic FOXO3 variant that disrupts an NKX3 transcription factor binding sit...
|
Longevity & Aging
|
|
Strong
|
|
rs397516919
|
DSP
DSP Trp550Ter
|
Nonsense variant in desmoplakin that truncates the protein at codon 550, caus...
|
Cardiomyopathy & Structural Heart
|
|
Strong
|
|
rs4073
|
IL8
-251A>T
|
Promoter variant affecting interleukin-8 transcription and inflammatory burden
|
Vascular Inflammation & Remodeling
|
|
Strong
|
|
rs429358
|
APOE
E4 determinant
|
Lipid metabolism and Alzheimer's risk - E4 carriers respond worse to high sat...
|
Cholesterol & Lipoproteins
|
|
Established
|
|
rs4654748
|
NBPF3
|
Tag SNP in the NBPF3/ALPL locus on chromosome 1 — the strongest common geneti...
|
Vitamins & Nutrient Absorption
|
|
Strong
|
|
rs505922
|
ABO
ABO blood group tag SNP
|
Tag SNP for the ABO blood group locus; T allele marks blood type O (lower clo...
|
Coronary Artery Disease & Atherosclerosis
|
|
Established
|
|
rs61754002
|
VWF
Y357X
|
Nonsense mutation creating a premature stop codon in von Willebrand factor; n...
|
Von Willebrand & Anticoagulant Proteins
|
|
Established
|
|
rs17857135
|
RNF213
Met270Thr
|
Missense variant (Met270Thr) in RNF213, the major moyamoya disease susceptibi...
|
Neurology & Cognition
|
|
Strong
|
|
rs2304795
|
PLIN1
|
Synonymous exon 8 variant in perilipin 1 that tags a haplotype associated wit...
|
Fat Storage & Energy
|
|
Moderate
|
|
rs2727270
|
FADS2
|
Intronic regulatory variant in FADS2 that tags a 10-SNP haplotype reducing ba...
|
Triglycerides & Fatty Acids
|
|
Moderate
|
|
rs2779249
|
NOS2
Promoter -1026C/A
|
Functional promoter variant that increases iNOS transcriptional activity up t...
|
Longevity & Aging
|
|
Moderate
|
|
rs3025058
|
MMP3
5A/6A
|
Promoter polymorphism affecting MMP3 enzyme expression levels, influencing ca...
|
Fitness & Body
|
|
Strong
|
|
rs397516923
|
DSP
DSP Q72Ter
|
Rare truncating variant in desmoplakin that creates a premature stop codon at...
|
Cardiomyopathy & Structural Heart
|
|
Moderate
|
|
rs4729189
|
PON2
|
Intronic PON2 variant associated with variation in serum paraoxonase activity...
|
Vascular Inflammation & Remodeling
|
|
Emerging
|
|
rs4783961
|
CETP
|
CETP promoter variant that raises HDL cholesterol by reducing cholesteryl est...
|
Cholesterol & Lipoproteins
|
|
Moderate
|
|
rs4986790
|
TLR4
Asp299Gly
|
Missense variant in Toll-like receptor 4 reducing bacterial endotoxin recogni...
|
Innate Immunity & Infection Defense
|
|
Strong
|
|
rs56062135
|
SMAD3
SMAD3 intronic variant
|
Intronic SMAD3 variant tagging the CAD-protective haplotype where the T allel...
|
Coronary Artery Disease & Atherosclerosis
|
|
Strong
|
|
rs5749131
|
TCN2
|
Upstream regulatory variant near TCN2 associated with reduced holotranscobala...
|
Vitamins & Nutrient Absorption
|
|
Moderate
|
|
rs61754010
|
VWF
N528S
|
Pathogenic missense variant in the VWF propeptide D2 domain that introduces a...
|
Von Willebrand & Anticoagulant Proteins
|
|
Strong
|
|
rs1801133
|
MTHFR
C677T
|
Key enzyme for converting folate to its active methylfolate form
|
Methylation & Detox
|
|
Established
|
|
rs2108622
|
CYP4F2
V433M (*3)
|
Reduces vitamin K metabolism, requiring higher warfarin doses to achieve anti...
|
Pharmacogenomics
|
|
Established
|
|
rs2605100
|
LYPLAL1
|
Intronic variant in the LYPLAL1 locus associated with waist-hip ratio and fat...
|
Fat Storage & Energy
|
|
Strong
|
|
rs2727271
|
FADS2
|
Intronic variant in FADS2 (delta-6 desaturase) associated with reduced enzyme...
|
Triglycerides & Fatty Acids
|
|
Moderate
|
|
rs2802292
|
FOXO3
|
Longevity-associated intronic enhancer variant with 1.9-fold increased probab...
|
Longevity & Aging
|
|
Established
|
|
rs397516929
|
DSP
Ser987Pro
|
Rare missense variant in desmoplakin that likely disrupts desmosomal integrit...
|
Cardiomyopathy & Structural Heart
|
|
Emerging
|
|
rs4986791
|
TLR4
Thr399Ile
|
Missense variant in Toll-like receptor 4 that co-segregates with Asp299Gly on...
|
Innate Immunity & Infection Defense
|
|
Strong
|
|
rs57035593
|
TC2N
|
Intronic variant in TC2N (tandem C2 domains, nuclear) robustly associated wit...
|
Coronary Artery Disease & Atherosclerosis
|
|
Strong
|
|
rs61754011
|
VWF
Gly550Arg
|
Pathogenic missense variant in the VWF propeptide D2 domain that prevents hig...
|
Von Willebrand & Anticoagulant Proteins
|
|
Established
|
|
rs662
|
PON1
Q192R
|
Affects paraoxonase-1 enzyme activity for detoxifying organophosphates and pr...
|
Vascular Inflammation & Remodeling
|
|
Moderate
|
|
rs1801181
|
CBS
A360A
|
A synonymous variant in CBS affecting homocysteine metabolism and associated ...
|
Methylation & Detox
|
|
Moderate
|
|
rs2231142
|
ABCG2
Q141K
|
Reduces ABCG2 transporter function affecting rosuvastatin levels and uric aci...
|
Pharmacogenomics
|
|
Established
|
|
rs2287161
|
CRY1
3' Downstream G>C
|
Cryptochrome 1 circadian gene variant influencing glucose metabolism, sleep t...
|
Hormones & Sleep
|
|
Strong
|
|
rs2651899
|
PRDM16
|
Intronic variant in the master regulator of brown/beige fat differentiation, ...
|
Fat Storage & Energy
|
|
Moderate
|
|
rs2811712
|
CDKN2BAS
|
Regulatory variant in the ANRIL long non-coding RNA at the 9p21.3 locus that ...
|
Longevity & Aging
|
|
Moderate
|
|
rs2854116
|
APOC3
T-455C
|
APOC3 promoter variant that disrupts insulin suppression of ApoC-III, raising...
|
Triglycerides & Fatty Acids
|
|
Strong
|
|
rs3736228
|
LRP5
A1330V
|
Wnt signaling co-receptor variant affecting bone mineral density and fracture...
|
Fitness & Body
|
|
Strong
|
|
rs397516933
|
DSP
DSP Gln1277Ter
|
Nonsense variant in desmoplakin that truncates the protein at codon 1277, cau...
|
Cardiomyopathy & Structural Heart
|
|
Strong
|
|
rs520354
|
APOB
APOB IVS6+360
|
Intronic APOB variant where the A allele (plus strand) is associated with app...
|
Cholesterol & Lipoproteins
|
|
Moderate
|
|
rs619203
|
ROS1
Ser2229Cys
|
Missense variant in the ROS1 receptor tyrosine kinase associated with atherot...
|
Coronary Artery Disease & Atherosclerosis
|
|
Emerging
|
|
rs6905288
|
VEGFA
|
Adipose tissue vascularization variant near VEGFA influencing fat distributio...
|
Vascular Inflammation & Remodeling
|
|
Moderate
|
|
rs867186
|
PROCR
S219G
|
Missense variant in the endothelial protein C receptor gene that increases EP...
|
Von Willebrand & Anticoagulant Proteins
|
|
Strong
|
|
rs2242480
|
CYP3A4
*1G
|
Intronic variant in CYP3A4 intron 10 that upregulates a suppressive lncRNA, r...
|
Pharmacogenomics
|
|
Strong
|
|
rs2291725
|
GIP
Ser103Gly
|
Missense variant in the GIP incretin hormone that changes its bioactivity and...
|
Hormones & Sleep
|
|
Moderate
|
|
rs266729
|
ADIPOQ
-11391G>C
|
Promoter variant reducing adiponectin transcription, increasing T2D, NAFLD, a...
|
Fat Storage & Energy
|
|
Strong
|
|
rs2854117
|
APOC3
APOC3 C-482T
|
Promoter variant in APOC3 disrupting insulin-responsive regulation of apolipo...
|
Triglycerides & Fatty Acids
|
|
Moderate
|
|
rs28933979
|
TTR
Val30Met (V30M)
|
Most common pathogenic TTR variant causing hereditary transthyretin amyloidos...
|
Longevity & Aging
|
|
Established
|
|
rs3801387
|
WNT16
|
Intronic variant affecting cortical bone thickness, bone mineral density, and...
|
Fitness & Body
|
|
Established
|
|
rs397516943
|
DSP
|
Pathogenic DSP nonsense variant creating a premature stop codon at position 1...
|
Cardiomyopathy & Structural Heart
|
|
Established
|
|
rs5888
|
SCARB1
|
Synonymous variant that reduces SR-BI receptor expression and impairs HDL cho...
|
Cholesterol & Lipoproteins
|
|
Moderate
|
|
rs602662
|
FUT2
Gly258Ser
|
Missense variant in the FUT2 fucosyltransferase enzyme that alters haptocorri...
|
Vitamins & Nutrient Absorption
|
|
Strong
|
|
rs6797312
|
SERPINI1
|
Intronic variant in the neuroserpin gene; the A allele has been associated wi...
|
Coronary Artery Disease & Atherosclerosis
|
|
Emerging
|
|
rs7030781
|
VEGFA
VEGFA Regulatory Co-variant
|
Chromosome 9 regulatory co-variant near a lncRNA locus that co-segregates wit...
|
Vascular Inflammation & Remodeling
|
|
Emerging
|
|
rs932764
|
PLCE1
|
Intronic variant in PLCE1 (phospholipase C epsilon 1) associated with elevate...
|
Endometriosis & Uterine Health
|
|
Strong
|
|
rs2246709
|
CYP3A4
|
Intronic CYP3A4 variant associated with altered drug clearance, affecting met...
|
Pharmacogenomics
|
|
Moderate
|
|
rs2918418
|
NR3C1
|
Intronic NR3C1 variant with CC genotype enriched in Polish centenarians; GG g...
|
Longevity & Aging
|
|
Emerging
|
|
rs2919872
|
FABP1
FABP1 Promoter Variant
|
Promoter variant 2 kb upstream of FABP1 (liver fatty acid binding protein) th...
|
Triglycerides & Fatty Acids
|
|
Moderate
|
|
rs397516946
|
DSP
DSP Q1810X
|
Pathogenic stop-gain in desmoplakin's tail domain; one copy truncates the pro...
|
Cardiomyopathy & Structural Heart
|
|
Strong
|
|
rs5743810
|
TLR6
Ser249Pro
|
Coding variant replacing serine with proline at TLR6 position 249, altering T...
|
Innate Immunity & Infection Defense
|
|
Moderate
|
|
rs606231236
|
APOB
|
Pathogenic APOB splice acceptor variant causing familial hypobetalipoproteine...
|
Cholesterol & Lipoproteins
|
|
Strong
|
|
rs6922269
|
MTHFD1L
|
Intronic variant in the mitochondrial folate enzyme MTHFD1L, associated with ...
|
Coronary Artery Disease & Atherosclerosis
|
|
Strong
|
|
rs705379
|
PON1
PON1 promoter -108C>T
|
Promoter polymorphism that controls PON1 gene expression — the T allele (A on...
|
Vascular Inflammation & Remodeling
|
|
Strong
|
|
rs7566605
|
INSIG2
|
Upstream regulatory variant near INSIG2 that influences lipogenesis control a...
|
Appetite & Obesity
|
|
Moderate
|
|
rs1802059
|
MTRR
|
Synonymous MTRR variant (c.1911G>A) associated with congenital heart disease ...
|
Methylation & Detox
|
|
Emerging
|
|
rs2280275
|
CYP2J2
|
Intronic variant in CYP2J2 that tags reduced epoxyeicosatrienoic acid (EET) p...
|
Pharmacogenomics
|
|
Moderate
|
|
rs2954021
|
TRIB1
|
Near-gene variant influencing hepatic lipid metabolism; G allele raises trigl...
|
Triglycerides & Fatty Acids
|
|
Established
|
|
rs2963154
|
NR3C1
|
Intronic NR3C1 variant with TT genotype enriched in Polish centenarians; C al...
|
Longevity & Aging
|
|
Emerging
|
|
rs41309766
|
NOTCH1
c.4512del (p.Cys1505fs)
|
Pathogenic frameshift deletion in NOTCH1 causing haploinsufficiency; carriers...
|
Cardiomyopathy & Structural Heart
|
|
Strong
|
|
rs4253778
|
PPARA
intron 7 G/C
|
Regulates fatty acid oxidation and muscle fiber composition, influencing endu...
|
Fitness & Body
|
|
Moderate
|
|
rs60910145
|
APOL1
G1 I384M
|
Second component of the APOL1 G1 kidney disease risk haplotype — a missense v...
|
Cholesterol & Lipoproteins
|
|
Established
|
|
rs700651
|
BOLL
|
Intronic variant near the BOLL gene associated with increased intracranial an...
|
Coronary Artery Disease & Atherosclerosis
|
|
Moderate
|
|
rs854555
|
PON1
PON1 3'UTR variant
|
Intronic/downstream PON1 haplotype-tagging variant associated with PON1 activ...
|
Vascular Inflammation & Remodeling
|
|
Emerging
|
|
rs3135506
|
APOA5
S19W
|
Triglyceride metabolism - affects fasting triglyceride levels and cardiovascu...
|
Triglycerides & Fatty Acids
|
|
Strong
|
|
rs4341
|
ACE
I/D tag SNP
|
Tag SNP for the ACE insertion/deletion polymorphism — the C allele tracks the...
|
Fitness & Body
|
|
Strong
|
|
rs4855559
|
MYH15
|
Intronic variant in the myosin heavy chain 15 gene associated with impaired c...
|
Cardiomyopathy & Structural Heart
|
|
Emerging
|
|
rs673548
|
APOB
|
Intronic APOB variant associated with modest differences in apolipoprotein B ...
|
Cholesterol & Lipoproteins
|
|
Moderate
|
|
rs7025486
|
DAB2IP
DAB2IP intron variant
|
Intronic variant in DAB2IP associated with increased risk of abdominal aortic...
|
Coronary Artery Disease & Atherosclerosis
|
|
Strong
|
|
rs854571
|
PON1
PON1 -108C>T promoter variant
|
Promoter variant that controls PON1 transcription; the T allele reduces PON1 ...
|
Vascular Inflammation & Remodeling
|
|
Strong
|
|
rs1808593
|
NOS3
|
Intronic NOS3 variant associated with ankle-brachial index and peripheral art...
|
Methylation & Detox
|
|
Moderate
|
|
rs2237886
|
KCNQ1
KCNQ1 Potassium Channel Diabetes Variant
|
Intronic variant in KCNQ1's imprinted region, tagging the same LD block as es...
|
Blood Sugar & Diabetes
|
|
Moderate
|
|
rs3211867
|
CD36
|
Intronic CD36 variant that reduces CD36 expression, impairing postprandial fa...
|
Triglycerides & Fatty Acids
|
|
Moderate
|
|
rs587782951
|
JPH2
Thr161Lys
|
Pathogenic missense variant in junctophilin-2 that disrupts sarcoplasmic reti...
|
Cardiomyopathy & Structural Heart
|
|
Strong
|
|
rs71785313
|
APOL1
G2 (del388N389Y)
|
Six-base-pair in-frame deletion removing two amino acids from apolipoprotein ...
|
Cholesterol & Lipoproteins
|
|
Established
|
|
rs74315329
|
MYOC
Gln368Ter (Q368X)
|
Pathogenic nonsense variant in myocilin causing autosomal dominant juvenile a...
|
Coronary Artery Disease & Atherosclerosis
|
|
Established
|
|
rs854572
|
PON1
PON1 promoter -909G>C
|
Promoter polymorphism that modulates PON1 gene expression level — the G allel...
|
Vascular Inflammation & Remodeling
|
|
Moderate
|
|
rs1979277
|
SHMT1
C1420T
|
Alters one-carbon metabolism and folate distribution; influences cancer risk,...
|
Methylation & Detox
|
|
Moderate
|
|
rs3211883
|
CD36
|
Intronic CD36 variant associated with altered body adiposity and platelet CD3...
|
Triglycerides & Fatty Acids
|
|
Moderate
|
|
rs3734254
|
PPARD
T+294C
|
PPARD 3'UTR variant that reduces fatty acid oxidation capacity and blunts the...
|
Fat Storage & Energy
|
|
Moderate
|
|
rs3803304
|
AKT1
|
Intronic AKT1 variant near a conserved exon-intron boundary; the G allele is ...
|
Longevity & Aging
|
|
Moderate
|
|
rs71180793
|
OBSCN
OBSCN c.23838del
|
Frameshift deletion in obscurin, a giant sarcomeric scaffold protein; heteroz...
|
Cardiomyopathy & Structural Heart
|
|
Emerging
|
|
rs753085
|
COL27A1
|
Intronic variant in COL27A1 (collagen type XXVII alpha-1) associated with alt...
|
Coronary Artery Disease & Atherosclerosis
|
|
Moderate
|
|
rs887829
|
UGT1A1
UGT1A1*80
|
Promoter variant in UGT1A1 that tags the *28 reduced-expression haplotype; T ...
|
Vascular Inflammation & Remodeling
|
|
Strong
|
|
rs2295490
|
TRIB3
Q84R
|
TRIB3 pseudokinase missense variant that increases Akt inhibition, impairing ...
|
Blood Sugar & Diabetes
|
|
Strong
|
|
rs4946935
|
FOXO3
|
Functionally validated FOXO3 intronic variant that creates an SRF binding sit...
|
Longevity & Aging
|
|
Strong
|
|
rs7412
|
APOE
E2 determinant
|
APOE E2 variant - generally protective for cardiovascular health
|
Cholesterol & Lipoproteins
|
|
Established
|
|
rs74315379
|
TNNT2
R141W / R151W
|
Rare pathogenic missense variant in cardiac troponin T causing calcium desens...
|
Cardiomyopathy & Structural Heart
|
|
Established
|
|
rs767603
|
LOC105378189
|
Regulatory variant near LOC105378189 non-coding RNA locus on chromosome 14q23...
|
Coronary Artery Disease & Atherosclerosis
|
|
Moderate
|
|
rs9298506
|
SOX17
|
Regulatory tag variant near SOX17 at chromosome 8q11.23 associated with intra...
|
Vascular Inflammation & Remodeling
|
|
Strong
|
|
rs987237
|
TFAP2B
|
Adipocyte transcription factor variant influencing central fat distribution a...
|
Appetite & Obesity
|
|
Moderate
|
|
rs35136575
|
APOC1P1
HCR-2 Enhancer Variant
|
Regulatory variant in the APOE/APOC hepatic enhancer HCR-2 that lowers plasma...
|
Triglycerides & Fatty Acids
|
|
Strong
|
|
rs3774261
|
ADIPOQ
ADIPOQ rs3774261
|
Intronic ADIPOQ variant that reduces circulating adiponectin levels in G alle...
|
Fat Storage & Energy
|
|
Moderate
|
|
rs76992529
|
TTR
Val142Ile (V142I)
|
Most common amyloidogenic TTR variant in African Americans, causing late-onse...
|
Cardiomyopathy & Structural Heart
|
|
Established
|
|
rs78707713
|
TSPAN15
|
Intronic TSPAN15 variant that modulates ADAM10-mediated shedding of GPVI, the...
|
Coronary Artery Disease & Atherosclerosis
|
|
Strong
|
|
rs8192870
|
CYP7A1
CYP7A1 intron 1 variant
|
Intronic variant in the rate-limiting bile acid synthesis gene; T allele carr...
|
Cholesterol & Lipoproteins
|
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Moderate
|
|
rs9939609
|
FTO
Intron 1 T>A
|
The most strongly replicated obesity-associated variant, affecting body weigh...
|
Appetite & Obesity
|
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Established
|
|
rs3734398
|
ELOVL2
|
3' UTR variant in the ELOVL2 elongase gene that reduces DHA synthesis from it...
|
Triglycerides & Fatty Acids
|
|
Strong
|
|
rs699
|
AGT
M235T
|
Angiotensinogen level variant affecting blood pressure, sodium sensitivity, a...
|
Fitness & Body
|
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Strong
|
|
rs6994076
|
TTPA
-980T>A
|
Regulates expression of the alpha-tocopherol transfer protein, the key determ...
|
Vitamins & Nutrient Absorption
|
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Strong
|
|
rs7664413
|
VEGFC
|
Intronic variant in the primary lymphangiogenesis growth factor gene associat...
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Innate Immunity & Infection Defense
|
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Emerging
|
|
rs77931234
|
ACADM
c.985A>G (p.Lys329Glu)
|
Pathogenic missense variant in ACADM reducing MCAD enzyme activity, predispos...
|
Cardiomyopathy & Structural Heart
|
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Established
|
|
rs838880
|
SCARB1
|
3' UTR variant in SCARB1 that tags a haplotype with reduced SR-BI expression ...
|
Cholesterol & Lipoproteins
|
|
Strong
|
|
rs9818870
|
MRAS
|
3' UTR variant near miRNA binding sites in MRAS, associated with ~15% increas...
|
Coronary Artery Disease & Atherosclerosis
|
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Strong
|
|
rs2070744
|
NOS3
T-786C promoter
|
NOS3 expression - controls how much eNOS enzyme is produced for nitric oxide ...
|
Methylation & Detox
|
|
Strong
|
|
rs3798713
|
ELOVL2
|
Intronic variant in ELOVL2 associated with altered plasma phospholipid PUFA l...
|
Triglycerides & Fatty Acids
|
|
Moderate
|
|
rs3856806
|
PPARG
His477His (C1431T)
|
Synonymous PPARG variant where the T allele reduces type 2 diabetes risk and ...
|
Fat Storage & Energy
|
|
Strong
|
|
rs7061710
|
FMO3
|
Intronic FMO3 variant associated with reduced hepatic oxidation of garlic-der...
|
Vitamins & Nutrient Absorption
|
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Moderate
|
|
rs2073067
|
MTHFD1L
MTHFD1L variant
|
Intronic variant in the mitochondrial folate enzyme MTHFD1L, associated with ...
|
Methylation & Detox
|
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Moderate
|
|
rs2943641
|
IRS1
Near-gene C>T
|
Regulates insulin signaling efficiency and cellular glucose uptake
|
Blood Sugar & Diabetes
|
|
Strong
|
|
rs3829462
|
LIPC
|
Missense variant in hepatic lipase encoding p.Phe356Leu; the rare C allele (P...
|
Triglycerides & Fatty Acids
|
|
Emerging
|
|
rs4684847
|
PPARG
PPARG cis-regulatory variant (PR domain recruitment)
|
Intronic cis-regulatory PPARG variant where the C allele recruits PR domain r...
|
Fat Storage & Energy
|
|
Moderate
|
|
rs5882
|
CETP
I405V
|
Missense variant that reduces CETP enzyme activity, raising HDL-C and enlargi...
|
Longevity & Aging
|
|
Moderate
|
|
rs2236224
|
MTHFD1
MTHFD1 R653Q
|
Intronic tag variant in MTHFD1 in strong LD with the R653Q missense variant, ...
|
Methylation & Detox
|
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Moderate
|
|
rs3487348
|
PTPN1
PTPN1 LD Block Co-Variant
|
Intronic PTPN1 variant in the 100-kb haplotype block; T allele associated wit...
|
Blood Sugar & Diabetes
|
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Moderate
|
|
rs3834458
|
FADS2
|
A 3-bp deletion in intron 3 of FADS2 that reduces delta-6 desaturase activity...
|
Triglycerides & Fatty Acids
|
|
Strong
|
|
rs4684854
|
PPARG
|
Intergenic regulatory variant downstream of PPARG associated with central obe...
|
Fat Storage & Energy
|
|
Emerging
|
|
rs6198
|
NR3C1
9β
|
3'UTR variant that increases glucocorticoid-resistant GRβ isoform expression,...
|
Longevity & Aging
|
|
Strong
|
|
rs9594759
|
TNFSF11
|
Regulatory variant in the RANKL gene affecting bone mineral density and osteo...
|
Fitness & Body
|
|
Strong
|
|
rs367643250
|
DYRK1B
R102C
|
Rare gain-of-function variant causing autosomal dominant metabolic syndrome (...
|
Blood Sugar & Diabetes
|
|
Strong
|
|
rs4148102
|
ABCG1
ABCG1 intronic PUFA-interaction variant
|
Intronic variant in the ABCG1 cholesterol efflux transporter gene that modifi...
|
Triglycerides & Fatty Acids
|
|
Emerging
|
|
rs659366
|
UCP2
|
Promoter variant at position -866 of UCP2 that controls mitochondrial uncoupl...
|
Longevity & Aging
|
|
Moderate
|
|
rs3787345
|
PTPN1
PTPN1 LD Block Co-Variant
|
Intronic PTPN1 tag SNP within the 100-kb PTP1B insulin-resistance haplotype b...
|
Blood Sugar & Diabetes
|
|
Moderate
|
|
rs4775065
|
LIPC
|
Intronic LIPC variant associated with susceptibility to low HDL-C and coronar...
|
Triglycerides & Fatty Acids
|
|
Moderate
|
|
rs4994
|
ADRB3
Trp64Arg
|
Beta-3 adrenergic receptor variant that impairs catecholamine-stimulated lipo...
|
Fat Storage & Energy
|
|
Moderate
|
|
rs6721961
|
NFE2L2
|
Promoter variant reducing NRF2 transcriptional activity by >50%, impairing th...
|
Longevity & Aging
|
|
Moderate
|
|
rs234706
|
CBS
C699T
|
Common synonymous variant in the CBS gene associated with reduced cardiovascu...
|
Methylation & Detox
|
|
Moderate
|
|
rs4783244
|
CDH13
|
Intronic CDH13 variant altering T-cadherin expression; T allele carriers have...
|
Triglycerides & Fatty Acids
|
|
Strong
|
|
rs5181
|
LRP8
Trp466Cys
|
Rare missense variant in the ApoE receptor 2 (LRP8) ligand-binding domain, di...
|
Fat Storage & Energy
|
|
Emerging
|
|
rs35599367
|
CYP3A4
*22
|
Intronic splice variant causing ~50% reduced CYP3A4 mRNA expression, affectin...
|
Pharmacogenomics
|
|
Established
|
|
rs4939883
|
LOC105372112
|
Intronic variant near LIPG whose T allele increases circulating endothelial l...
|
Triglycerides & Fatty Acids
|
|
Strong
|
|
rs660339
|
UCP2
Ala55Val
|
Missense variant reducing mitochondrial uncoupling efficiency in white adipos...
|
Fat Storage & Energy
|
|
Moderate
|
|
rs2228145
|
IL6R
Asp358Ala
|
Missense variant in the IL-6 receptor that increases receptor shedding and en...
|
Allergy & Atopic Disease
|
|
Strong
|
|
rs5082
|
APOA2
-265T>C
|
Promoter variant that reduces APOA2 expression by 30%; GG homozygotes consumi...
|
Triglycerides & Fatty Acids
|
|
Strong
|
|
rs7675998
|
NAF1
|
Regulatory variant near the NAF1 telomerase assembly gene associated with sho...
|
Longevity & Aging
|
|
Strong
|
|
rs5085
|
APOA2
APOA2 rs5085
|
Intronic APOA2 tag SNP that captures the saturated fat-weight gain interactio...
|
Triglycerides & Fatty Acids
|
|
Strong
|
|
rs6954668
|
SFRP5
SFRP5 Wnt5a inhibitor variant
|
Intergenic variant near the SFRP5 adipokine locus; the A allele is strongly e...
|
Fat Storage & Energy
|
|
Emerging
|
|
rs7895833
|
SIRT1
A>G
|
Intronic variant in SIRT1 affecting NAD-dependent deacetylase expression and ...
|
Longevity & Aging
|
|
Moderate
|
|
rs3733890
|
BHMT
R239Q
|
Missense variant in betaine-homocysteine methyltransferase that reduces enzym...
|
Methylation & Detox
|
|
Moderate
|
|
rs57137919
|
ABCG1
|
ABCG1 promoter variant that reduces transporter expression, impairing macroph...
|
Triglycerides & Fatty Acids
|
|
Moderate
|
|
rs8192678
|
PPARGC1A
Gly482Ser
|
Master mitochondrial biogenesis regulator — Ser482 variant reduces PGC-1alpha...
|
Longevity & Aging
|
|
Strong
|
|
rs3758581
|
CYP2C19
Ile331Val (CYP2C19*1B)
|
Common CYP2C19 missense variant defining the *1B allele; the G (Val331) allel...
|
Pharmacogenomics
|
|
Moderate
|
|
rs5956
|
CD36
|
Synonymous coding variant in CD36 fatty acid translocase; the minor A allele ...
|
Triglycerides & Fatty Acids
|
|
Emerging
|
|
rs709158
|
PPARG
|
Intronic PPARG variant in strong linkage disequilibrium with rs1175543; the G...
|
Fat Storage & Energy
|
|
Emerging
|
|
rs9420907
|
OBFC1
|
Intronic variant in the CST complex component STN1/OBFC1 that influences telo...
|
Longevity & Aging
|
|
Strong
|
|
rs6507931
|
LIPG
|
Intronic LIPG variant that modulates HDL cholesterol levels, with strongest e...
|
Triglycerides & Fatty Acids
|
|
Moderate
|
|
rs7649970
|
PPARG
PPARG C-689T
|
PPARG PPARγ2 P2 promoter variant that reduces basal promoter activity, elevat...
|
Fat Storage & Energy
|
|
Moderate
|
|
rs9470080
|
FKBP5
|
Intronic FKBP5 variant in the stress-aging haplotype block — T allele carrier...
|
Longevity & Aging
|
|
Strong
|
|
rs692383
|
ABCG1
ABCG1 HDL-c Variant
|
Intronic variant in the ABCG1 cholesterol efflux transporter gene associated ...
|
Triglycerides & Fatty Acids
|
|
Emerging
|
|
rs767870
|
ADIPOR2
ADIPOR2 intron 6 variant
|
Intronic variant in ADIPOR2 (adiponectin receptor 2) associated with reduced ...
|
Fat Storage & Energy
|
|
Moderate
|
|
rs9536314
|
KLOTHO
F352V (KL-VS)
|
Longevity-associated variant exhibiting overdominance where heterozygotes sho...
|
Longevity & Aging
|
|
Strong
|
|
rs3814637
|
CYP2C19
|
Upstream CYP2C19 variant associated with altered R-warfarin clearance and inc...
|
Pharmacogenomics
|
|
Moderate
|
|
rs5443
|
GNB3
C825T
|
Synonymous exon-10 variant that triggers alternative splicing of the G-protei...
|
Hormones & Sleep
|
|
Strong
|
|
rs8034802
|
LIPC
|
Intronic LIPC variant associated with higher baseline HDL-C and an amplified ...
|
Triglycerides & Fatty Acids
|
|
Emerging
|
|
rs822391
|
ADIPOQ
IVS1+407C>T
|
Intronic variant in the adiponectin gene associated with circulating adiponec...
|
Fat Storage & Energy
|
|
Moderate
|
|
rs9491696
|
RSPO3
|
Intronic enhancer variant in RSPO3 that increases gene expression in adipocyt...
|
Fat Storage & Energy
|
|
Strong
|
|
rs953413
|
ELOVL2
|
Intronic enhancer variant in ELOVL2 that controls transcription factor bindin...
|
Triglycerides & Fatty Acids
|
|
Strong
|
|
rs3751143
|
P2RX7
Glu496Ala
|
Loss-of-function variant in the P2X7 receptor that reduces inflammatory respo...
|
Neurology & Cognition
|
|
Strong
|
|
rs5219
|
KCNJ11
E23K
|
Controls the pancreatic beta-cell potassium channel that regulates insulin se...
|
Blood Sugar & Diabetes
|
|
Strong
|
|
rs964184
|
ZNF259
ZNF259/BUD13 Triglyceride Variant
|
Common regulatory variant at the APOA5-ZNF259 locus; G allele reduces ApoAV p...
|
Triglycerides & Fatty Acids
|
|
Strong
|
|
rs4148323
|
UGT1A1
*6 Gly71Arg
|
Phase II glucuronidation enzyme that metabolizes bilirubin and many drugs inc...
|
Pharmacogenomics
|
|
Established
|
|
rs564398
|
CDKN2B-AS1
|
Secondary T2D risk variant at the 9p21 CDKN2A/B locus within ANRIL (CDKN2B-AS...
|
Blood Sugar & Diabetes
|
|
Moderate
|
|
rs968567
|
FADS2
FADS2 Promoter D6D Activity Variant
|
Promoter variant in FADS2 that increases delta-6 desaturase (D6D) expression ...
|
Triglycerides & Fatty Acids
|
|
Moderate
|
|
rs4149056
|
SLCO1B1
*5
|
Statin transport - affects muscle side effect risk with statins
|
Pharmacogenomics
|
|
Established
|
|
rs587777380
|
DYRK1B
H90P / H90R
|
Multi-allelic pathogenic locus — both H90P (T>G) and H90R (T>C) disrupt the D...
|
Blood Sugar & Diabetes
|
|
Strong
|
|
rs6885099
|
PDE8B
PDE8B TSH variant
|
Intronic TSH quantitative trait locus in phosphodiesterase 8B — the G allele ...
|
Hormones & Sleep
|
|
Strong
|
|
rs9951026
|
LIPG
|
Intronic LIPG variant that tags a haplotype associated with higher LDL choles...
|
Triglycerides & Fatty Acids
|
|
Moderate
|
|
rs3851179
|
PICALM
|
Variant in the PICALM gene affecting amyloid-beta clearance across the blood-...
|
Neurology & Cognition
|
|
Established
|
|
rs99780
|
FADS2
|
Intronic variant in the FADS1-FADS2 cluster influencing delta-6 desaturase ac...
|
Triglycerides & Fatty Acids
|
|
Moderate
|
|
rs4880
|
SOD2
Val16Ala
|
Primary mitochondrial antioxidant enzyme - variant reduces superoxide detoxif...
|
Methylation & Detox
|
|
Strong
|
|
rs6020611
|
PTPN1
|
Intronic PTPN1 tag SNP in the PTP1B regulatory LD block; the minor A allele i...
|
Blood Sugar & Diabetes
|
|
Moderate
|
|
rs567754
|
BHMT
BHMT-02
|
Intronic variant in betaine-homocysteine methyltransferase gene associated wi...
|
Methylation & Detox
|
|
Moderate
|
|
rs61886492
|
FOLH1
H475Y
|
Reduces intestinal GCPII enzyme activity by 53%, paradoxically raising circul...
|
Methylation & Detox
|
|
Strong
|
|
rs653178
|
SH2B3
ATXN2/SH2B3 12q24 pleiotropic locus
|
Pleiotropic 12q24 locus variant in SH2B3 (LNK) modulating JAK-STAT cytokine s...
|
Blood Sugar & Diabetes
|
|
Strong
|
|
rs6814664
|
SLC2A9
SLC2A9 Uric Acid Transport Variant
|
Intronic SLC2A9 variant tagging a regulatory signal for renal urate reabsorpt...
|
Blood Sugar & Diabetes
|
|
Moderate
|
|
rs55785340
|
CYP3A4
*2
|
Missense variant reducing CYP3A4-mediated nifedipine clearance, causing eleva...
|
Pharmacogenomics
|
|
Moderate
|
|
rs6815001
|
SLC2A9
SLC2A9 Renal Urate Clearance Variant
|
Intronic variant in the major renal urate transporter; the G allele tags a ha...
|
Blood Sugar & Diabetes
|
|
Strong
|
|
rs819147
|
AHCY
|
Regulatory variant affecting S-adenosylhomocysteine hydrolase expression, inf...
|
Methylation & Detox
|
|
Moderate
|
|
rs891512
|
NOS3
|
Intronic NOS3 variant that alters splicing factor binding and is associated w...
|
Methylation & Detox
|
|
Moderate
|
|
rs4129267
|
IL6R
IL6R intronic multi-trait variant
|
Intronic IL6R variant in perfect linkage disequilibrium with the functional A...
|
Allergy & Atopic Disease
|
|
Strong
|
|
rs780095
|
GCKR
GCKR Glucose-Lipid Regulation Variant
|
Intronic GCKR enhancer variant on the CGG regulatory haplotype; the G allele ...
|
Blood Sugar & Diabetes
|
|
Moderate
|
|
rs914232
|
SLC19A1
RFC1 -43T>C
|
Regulatory variant that reduces reduced folate carrier protein expression, im...
|
Methylation & Detox
|
|
Moderate
|
|
rs6025
|
F5
Leiden
|
Factor V Leiden - blood clotting disorder affecting thrombosis risk
|
Pharmacogenomics
|
|
Established
|
|
rs63750066
|
APP
A713T (Calabrian)
|
Rare pathogenic missense variant in APP at the gamma-secretase cleavage site ...
|
Neurology & Cognition
|
|
Strong
|
|
rs67784355
|
CYP3A4
*11 (Thr363Met)
|
Rare missense variant in CYP3A4 that reduces protein expression and enzymatic...
|
Pharmacogenomics
|
|
Emerging
|
|
rs67338227
|
FHL5
|
Intronic variant in FHL5 (four and a half LIM domains 5), a transcriptional c...
|
Neurology & Cognition
|
|
Strong
|
|
rs72547511
|
CYP1A2
CYP1A2*15 (Pro42Arg)
|
Rare CYP1A2 missense variant at the critical Pro42 position; nearly abolishes...
|
Pharmacogenomics
|
|
Moderate
|
|
rs72547515
|
CYP1A2
*16 (Arg377Gln)
|
Nearly-inactive CYP1A2 missense variant — carriers have severely impaired met...
|
Pharmacogenomics
|
|
Moderate
|
|
rs872129
|
CHI3L1
CHI3L1 eQTL Variant
|
Third independent eQTL signal at the CHI3L1/YKL-40 locus on chromosome 1q32.1...
|
Allergy & Atopic Disease
|
|
Moderate
|
|
rs762551
|
CYP1A2
*1F
|
CYP1A2 *1F intronic inducibility variant — defines fast vs slow caffeine meta...
|
Pharmacogenomics
|
|
Strong
|
|
rs75932628
|
TREM2
R47H
|
Rare missense variant in microglial receptor TREM2 that significantly increas...
|
Neurology & Cognition
|
|
Established
|
|
rs8007267
|
GCH1
|
Promoter variant affecting GTP cyclohydrolase 1 expression and pain sensitivi...
|
Neurology & Cognition
|
|
Strong
|
|
rs8065080
|
TRPV1
Ile585Val
|
Capsaicin receptor variant affecting heat and pain sensitivity
|
Neurology & Cognition
|
|
Strong
|
|
rs9349379
|
PHACTR1
|
Intronic regulatory variant in PHACTR1 that controls endothelin-1 and arteria...
|
Neurology & Cognition
|
|
Strong
|