rs61748497 — VWF C1060R
Pathogenic missense in the VWF D3 domain that abolishes factor VIII binding; homozygotes and compound heterozygotes develop type 2N von Willebrand disease, presenting as low FVIII with normal VWF antigen and often misdiagnosed as haemophilia A
Details
- Gene
- VWF
- Chromosome
- 12
- Risk allele
- G
- Clinical
- Pathogenic
- Evidence
- Established
Population Frequency
Tags
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VWF C1060R — When the Clotting Carrier Cannot Hold Its Cargo
Von Willebrand factor (VWF) does two jobs in haemostasis: it captures platelets at sites of
vascular injury, and it acts as a molecular chaperone that binds and shields coagulation
factor VIII11 factor VIII
the clotting protein deficient in haemophilia A; VWF keeps it from being degraded in the bloodstream before it is needed
from premature proteolytic clearance. The rs61748497 variant — encoding the p.Cys1060Arg
substitution in the D3 domain — specifically cripples the second job. VWF quantity is normal,
platelet plug formation is intact, but FVIII levels fall because the carrier protein can no
longer hold its cargo. The result is a condition classified as
von Willebrand disease type 2N22 von Willebrand disease type 2N
named for Normandy, France, where the subtype was first
described — a bleeding disorder that mimics
haemophilia A but arises from a VWF gene defect rather than an FVIII gene defect.
The Mechanism
The VWF gene sits on the minus strand of chromosome 12p13.31. The rs61748497 variant is described as c.3178T>C on the coding strand (NM_000552.5), which corresponds to the plus-strand genomic change NC_000012.12:g.6025624A>G. The substitution converts codon 1060 from TGT (cysteine) to CGT (arginine) — p.Cys1060Arg. Cysteine residues frequently participate in disulphide bonds that maintain tertiary protein structure; the C1060 residue is located in the C8_3 subdomain of the D3 domain, a region critical for the three-dimensional architecture of the VWF-FVIII interaction interface.
Przeradzka et al. (2018)33 Przeradzka et al. (2018)
Przeradzka MA et al. The D' domain of VWF requires the presence
of the D3 domain for optimal factor VIII binding. Biochem J. 2018
used chemical footprinting mass spectrometry to demonstrate that C1060R induces conformational
changes in the D3 domain that are quantitatively proportional to the reduction in FVIII binding
affinity. The mutation does not simply remove a single contact point — it disrupts the overall
fold of the D3 domain in a way that reduces the capacity of the neighbouring D' domain (the
canonical FVIII binding site) to engage factor VIII effectively. The result is a FVIII binding
capacity that ranges from severely reduced to completely absent depending on whether the patient
carries one or two copies of the mutant allele.
The Evidence
The definitive characterization of C1060R comes from
Hilbert et al. (2003)44 Hilbert et al. (2003)
Hilbert L et al. Two novel mutations, Q1053H and C1060R, located in
the D3 domain of VWF, are responsible for decreased FVIII-binding capacity. Br J Haematol.
2003;120(4):627-32, who identified the mutation
in seven unrelated French families with type 2N VWD and confirmed its functional impact through
site-directed mutagenesis and transient expression in COS-7 cells. C1060R was found in
heterozygous, homozygous, and compound heterozygous states, with phenotypic severity tracking
the number of mutant alleles. Its occurrence outside the originally described FVIII-binding
tryptic fragment (D' domain, residues 764–1035) established that D3 domain integrity is
independently required for FVIII binding.
The index description of a clinically important compound heterozygous case appears in
Mazurier et al. (2002)55 Mazurier et al. (2002)
Mazurier C et al. Factor VIII deficiency not induced by FVIII gene
mutation in a female first cousin of two brothers with haemophilia A. Br J Haematol.
2002;119(2):390-2: a 20-year-old woman with
reduced FVIII activity was initially thought to be an obligate carrier of the family's
haemophilia A mutation. She was instead found to carry compound heterozygosity for Y357X
(a VWF null allele, rs61754002) and C1060R. Her VWF antigen levels were very low due to
the null allele, her VWF:FVIII binding was undetectable, and her FVIII activity was severely
reduced — a phenotype indistinguishable from haemophilia A on conventional testing. This case
illustrates the diagnostic trap: any female presenting with isolated FVIII deficiency should
have VWF molecular testing before haemophilia A carrier status is assumed.
The
2021 ASH/ISTH/NHF/WFH diagnostic guidelines66 2021 ASH/ISTH/NHF/WFH diagnostic guidelines
James PD et al. ASH ISTH NHF WFH 2021
guidelines on the diagnosis of VWD. Blood Adv. 2021;5(1):280-300
specifically include a diagnostic algorithm for type 2N: low FVIII with normal or borderline
VWF antigen and ristocetin cofactor activity is the laboratory signature. Confirmation requires
a VWF:FVIII binding assay — a test that directly measures VWF's capacity to bind factor VIII
at physiological conditions. Genetic testing (sequencing of VWF exons encoding the D' and D3
domains) is recommended alongside phenotypic assays because heterozygous carriers can present
with borderline laboratory values, and accurate diagnosis is essential for correct treatment.
Practical Actions
The critical clinical point is that desmopressin (DDAVP) does not correct the type 2N defect.
Desmopressin releases stored VWF from endothelial cells, temporarily raising VWF antigen and
— secondarily — FVIII levels. But the released VWF still carries the C1060R mutation and
cannot bind FVIII normally: within hours, FVIII levels fall back as unprotected factor VIII
is cleared from circulation. For haemostasis in type 2N patients, only VWF/FVIII concentrate
(which delivers functional FVIII directly alongside VWF) reliably restores haemostatic
competence. The
2021 management guidelines77 2021 management guidelines
Connell NT et al. ASH ISTH NHF WFH 2021 guidelines on the
management of VWD. Blood Adv. 2021;5(1):301-325
recommend VWF/FVIII concentrate as the treatment of choice for type 2N, targeting VWF
activity and FVIII activity ≥0.50 IU/mL peri-operatively.
Heterozygous carriers may or may not have measurable clinical phenotypes, depending on FVIII levels. Some carriers have FVIII in the low-normal range (40–60 IU/dL) and are entirely asymptomatic; others fall below normal thresholds and have mild bleeding symptoms, particularly around surgery or childbirth.
Interactions
C1060R is most clinically significant in compound heterozygous combination with a VWF null allele — where one allele produces no VWF protein and the other produces VWF that cannot bind FVIII. The index case (Mazurier 2002) carried C1060R together with Y357X (rs61754002), a nonsense allele that produces no VWF at all. In that combination, VWF antigen is reduced (driven by the null allele), VWF:FVIII binding is abolished (driven by C1060R), and FVIII activity is critically low — a full phenotypic haemophilia A presentation in a VWF gene carrier. Any VWF null allele (type 3 disease allele) on the second chromosome would produce a similar compound effect.
Blood group O independently lowers VWF antigen by 15–25%, which may push a heterozygous C1060R carrier's effective FVIII levels further below the normal range and worsen clinical bleeding phenotype without affecting the molecular defect.
Genotype Interpretations
What each possible genotype means for this variant:
No VWF C1060R allele detected
You carry two copies of the reference A allele at rs61748497. Your VWF D3 domain does not contain the C1060R substitution, and your von Willebrand factor retains its full capacity to bind and protect factor VIII. This is the normal genotype, carried by the vast majority of people worldwide. Other factors — VWF antigen levels, blood group O, thyroid function — can still influence circulating FVIII levels independently of this SNP.
One copy of VWF C1060R — carrier status with possible mild FVIII binding reduction
In heterozygous carriers, approximately half of circulating VWF carries the C1060R substitution and has impaired FVIII binding. The intact allele's VWF is sufficient to maintain FVIII in an adequate range for most individuals. However, the D3 domain conformational disruption caused by C1060R means the mutant VWF competes poorly for FVIII binding — so unprotected FVIII may be cleared at a faster-than-normal rate on the mutant fraction, producing a mild FVIII deficiency in a minority of carriers. A VWF:FVIII binding assay directly measures this capacity; a reduced result in a carrier with borderline FVIII warrants a type 2N diagnosis and treatment planning before surgical or obstetric procedures. First-degree relatives have a 50% chance of inheriting the allele.
Two copies of VWF C1060R — type 2N von Willebrand disease with critically impaired FVIII binding
In homozygous C1060R individuals, no VWF with intact FVIII binding capacity is produced. FVIII half-life in the circulation is dramatically shortened because its protective carrier is non-functional; FVIII activity typically falls to 1–15% of normal, placing patients in the moderate-to-severe haemophilia A range by FVIII:C measurement. However, the mutation does not affect VWF's platelet-bridging function: VWF antigen, VWF ristocetin cofactor activity, and VWF multimer pattern are all normal or near-normal, distinguishing type 2N from haemophilia A and from other VWD subtypes. The VWF:FVIII binding assay — which directly measures VWF's capacity to bind factor VIII — is the defining diagnostic test, typically showing severely reduced or absent binding activity in homozygotes. Treatment requires VWF/FVIII concentrate (not recombinant FVIII alone and not desmopressin), which delivers both functional VWF to carry factor VIII and the FVIII itself. The 2021 ASH/ISTH guidelines recommend a VWF activity and FVIII:C target of ≥0.50 IU/mL for peri-operative haemostatic cover.