rs1801280 — NAT2 I114T
Phase II detoxification - acetylation of aromatic amines and certain medications
Details
- Gene
- NAT2
- Chromosome
- 8
- Risk allele
- C
- Protein change
- p.Ile114Thr
- Consequence
- Missense
- Inheritance
- Autosomal Recessive
- Clinical
- Risk Factor
- Evidence
- Established
- Chip coverage
- v3 v4 v5
Population Frequency
Ancestry Frequencies
Related SNPs
Category
Methylation & DetoxNAT2 I114T - Your Detoxification Speed
N-acetyltransferase 2 (NAT2) is a Phase II 11 Phase II detoxification conjugates reactive intermediates from Phase I with small molecules to make them water-soluble and excretable detoxification enzyme that adds an acetyl group to aromatic amines and hydrazines, making them water-soluble so your body can excrete them. These substrates include environmental carcinogens from cigarette smoke, heterocyclic amines 22 Heterocyclic amines are carcinogenic compounds formed when meat is cooked at high temperatures, especially charring or grilling from cooked meat, and medications like isoniazid (tuberculosis treatment) and sulfasalazine.
The Mechanism
The I114T variant (rs1801280) changes isoleucine to threonine at position 114 of the NAT2 protein. The C allele (Thr) destabilizes the enzyme, leading to faster degradation and lower acetylation capacity. This is one of the most common "slow acetylator" alleles in European populations, characterizing the NAT2*5B haplotype. The C allele frequency is remarkably high in Europeans (~44%) but very rare in East Asians (~3%).
Slow vs. Rapid Acetylators
NAT2 acetylator status is determined by the combination of multiple variants (rs1801280, rs1799930, rs1208). You need two slow alleles (one from each parent) to be a slow acetylator. About 50-60% of Europeans are slow acetylators 33 This high frequency suggests slow acetylation may have been advantageous in certain ancestral environments due to the high frequency of these variants, compared to only 10-20% of East Asians.
Clinical Significance
Slow acetylators have increased risk of bladder cancer from occupational exposure
to aromatic amines. A major meta-analysis44 major meta-analysis
Garcia-Closas M et al. NAT2 slow acetylation and bladder cancer risk. Lancet, 2005
found an overall OR of 1.4 (95% CI 1.2-1.7) for bladder cancer in slow acetylators,
with stronger effects in cigarette smokers. Slow acetylators also require dose
adjustments for isoniazid and are more prone to drug-induced lupus from certain
medications. However, slow acetylation may actually be protective in some contexts -
rapid acetylators have higher colorectal cancer risk from heterocyclic amines in
well-done meat.
Practical Advice
If you are a slow acetylator: minimize exposure to cigarette smoke (active and secondhand), moderate consumption of heavily charred or grilled meats, and inform your doctor of your acetylator status if prescribed isoniazid or other NAT2 substrate medications.
Drug Interactions
Genotype Interpretations
What each possible genotype means for this variant:
Rapid acetylator at this position
Normal rapid acetylation at this NAT2 position. About 36% of Europeans share this genotype.
Intermediate acetylator
You carry one slow acetylator variant at this position. Combined with other NAT2 variants, this determines your overall acetylation speed. About 47% of Europeans share this genotype.
Slow acetylator at this position
Slow acetylation at this NAT2 position. About 17% of Europeans are homozygous for this variant. This strongly predicts slow acetylator phenotype.
Key References
Accuracy of various NAT2 SNP genotyping panels to infer acetylator phenotypes - rs1801280 in optimal 4-SNP panel
Garcia-Closas et al. NAT2 slow acetylation and bladder cancer risk meta-analysis (OR 1.4 for smokers)
Meta-analysis of NAT2 gene polymorphisms and cancer susceptibility