rs1805794 — NBN E185Q
Component of the MRN complex essential for DNA double-strand break repair, telomere maintenance, and cell cycle checkpoint signaling; this variant alters the BRCT domain and modestly impairs DNA damage response
Details
- Gene
- NBN
- Chromosome
- 8
- Risk allele
- G
- Protein change
- p.Glu185Gln
- Consequence
- Missense
- Inheritance
- Codominant
- Clinical
- Risk Factor
- Evidence
- Strong
- Chip coverage
- v3 v4 v5
Population Frequency
Ancestry Frequencies
Related SNPs
Category
Cancer RiskSee your personal result for NBN
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NBN E185Q — Your DNA Double-Strand Break Repair Sensor
Every day, your cells sustain tens of thousands of DNA lesions from normal
metabolism, environmental exposures, and replication errors. Most are
single-strand nicks that are easily patched. But the most dangerous lesions
are double-strand breaks (DSBs)11 double-strand breaks (DSBs)
A complete break through both strands of
the DNA helix. Left unrepaired, DSBs cause chromosomal rearrangements,
deletions, or cell death. Even a single unrepaired DSB can trigger
apoptosis., which sever both strands of the helix simultaneously. The
protein encoded by the NBN gene (also known as NBS1, or nibrin) is the
molecular sensor that detects these breaks and initiates the repair cascade.
NBN forms the MRN complex22 MRN complex
A trimeric complex of MRE11, RAD50, and NBN
(NBS1) that is the first responder to DNA double-strand breaks. MRE11
provides nuclease activity, RAD50 bridges broken DNA ends, and NBN recruits
the complex to damage sites and activates ATM kinase signaling. together
with MRE11 and RAD50. This complex is the first responder at DSB sites: it
recognizes the break, tethers the broken ends, activates the ATM checkpoint
kinase, and channels repair through either
homologous recombination33 homologous recombination
Error-free repair that uses the sister
chromatid as a template. Preferred in S/G2 phase when a template is
available. or
non-homologous end joining44 non-homologous end joining
Faster but error-prone repair that directly
ligates broken ends. Used throughout the cell cycle.. Beyond DSB repair,
the MRN complex maintains telomere integrity, enables immunoglobulin class
switching, and coordinates cell cycle checkpoints.
The rs1805794 variant causes a glutamic acid-to-glutamine substitution at
position 185 (E185Q), located within the
BRCT1 domain55 BRCT1 domain
BRCA1 C-terminal domain -- a phosphoprotein-binding module
found in many DNA damage response proteins. In NBN, the tandem FHA-BRCT
domains mediate interaction with gamma-H2AX at DSB sites and recruit the
BASC (BRCA1-associated genome surveillance complex). of the NBN protein.
This domain is critical for recruiting the MRN complex to DSB sites through
interaction with phosphorylated histone H2AX (gamma-H2AX) and BRCA1.
The Mechanism
The E185Q substitution replaces a negatively charged glutamic acid with an
uncharged glutamine in the BRCT1 domain. This alters the electrostatic
surface that mediates protein-protein interactions at DNA damage sites.
Functional studies by Fang et al.66 Functional studies by Fang et al.
Fang W et al. The functional
polymorphism of NBS1 p.Glu185Gln is associated with an increased risk of
lung cancer in Chinese populations. Mutat Res,
2014 demonstrated that cells
carrying the Gln185 variant exhibited significantly more DNA breaks after
X-ray exposure compared to cells with wild-type Glu185, and lymphocytes
from variant carriers showed greater chromosomal damage following ionizing
radiation. This indicates a measurable reduction in DSB repair efficiency.
The variant also showed a gene-environment interaction with medical ionizing radiation exposure (interaction p = 0.015), suggesting that the repair deficiency becomes more consequential under conditions of increased DNA damage load.
The Evidence
The cancer risk evidence has been evaluated across multiple large
meta-analyses. The
first comprehensive meta-analysis77 first comprehensive meta-analysis
Lu M et al. Association between the
NBS1 E185Q polymorphism and cancer risk: a meta-analysis. BMC Cancer,
2009 pooled 16 studies with
9,734 cancer cases and 10,325 controls. Carriers of GC/CC genotypes
(containing the Gln185 variant) had a modest but significant 1.06-fold
elevated overall cancer risk (OR 1.06, 95% CI 1.00-1.12), with a
slightly stronger effect in Caucasians (OR 1.07, 95% CI 1.01-1.14).
An
updated meta-analysis of 48 studies88 updated meta-analysis of 48 studies
He YZ et al. NBS1 Glu185Gln
polymorphism and cancer risk: update on current evidence. Tumor Biol,
2014 covering 17,159 cases
and 22,002 controls found no significant association with overall cancer
risk but identified increased risk for specific cancer types: leukemia,
nasopharyngeal carcinoma, and urinary system cancers.
The strongest site-specific evidence is for lung cancer. A
meta-analysis of six lung cancer studies99 meta-analysis of six lung cancer studies
Wang L et al. Association
between the NBS1 Glu185Gln polymorphism and lung cancer risk. Mol Biol
Rep, 2013 comprising 2,348
cases and 2,401 controls found OR 1.21 (95% CI 1.07-1.37) in the
dominant model, with the effect driven by Asian populations (OR 1.22,
95% CI 1.06-1.41).
For prostate cancer, a
Portuguese case-control study1010 Portuguese case-control study
Silva J et al. DNA repair system and
prostate cancer progression: the role of NBS1 polymorphism (rs1805794).
DNA Cell Biol, 2012 of 425
patients found that GG carriers had nearly two-fold increased risk for
advanced prostate disease (OR 1.87, 95% CI 1.26-2.79). In renal cell
carcinoma, male patients carrying the variant C allele showed a
nearly four-fold increase in 5-year mortality risk1111 nearly four-fold increase in 5-year mortality risk
Rosinha A et al.
DNA repair system and renal cell carcinoma prognosis: under the influence
of NBS1. Med Oncol, 2015
(HR 3.92, 95% CI 1.33-11.57).
Notably, breast cancer meta-analyses have consistently shown
no significant association1212 no significant association
Yao F et al. Association between the NBS1
Glu185Gln polymorphism and breast cancer risk: a meta-analysis. Tumor
Biol, 2013 (14 studies,
6,642 cases, 7,138 controls; OR 1.05, 95% CI 0.80-1.39).
Practical Implications
The E185Q variant produces a small but real reduction in DSB repair capacity. The effect sizes are modest (OR 1.06-1.21 depending on cancer type), consistent with a common variant contributing a small increment of risk. The practical response is to minimize unnecessary DNA damage and support the repair machinery you have.
Zinc is structurally essential for multiple DNA repair proteins, including zinc finger motifs in the MRN complex and downstream repair factors. NAD+ is the substrate consumed by PARP enzymes during the initial DNA damage response -- PARP1 detects strand breaks and uses NAD+ to synthesize poly(ADP-ribose) chains that recruit repair factors including the MRN complex. Maintaining adequate NAD+ levels ensures this signaling pathway operates at full capacity.
Minimizing avoidable sources of DNA damage -- particularly ionizing radiation exposure beyond clinical necessity -- is especially relevant given the documented gene-radiation interaction.
Interactions
NBN works in the same DNA damage response as XRCC1 R399Q (rs25487), ERCC2 D312N (rs1799793), and XRCC1 R194W (rs1799782). XRCC1 coordinates base excision repair and single-strand break repair, while ERCC2 participates in nucleotide excision repair. Individuals carrying risk alleles in both NBN and one or more XRCC genes would have compounded impairment across multiple arms of the DNA damage response. Published studies have examined combined genotype effects on cancer risk, with some finding multiplicative interactions for lung and bladder cancer. A compound action covering NBN E185Q plus XRCC1 risk genotypes could recommend intensified DNA repair support (zinc, NAD+ precursors, and targeted screening) beyond what either individual variant warrants alone.
Nutrient Interactions
Genotype Interpretations
What each possible genotype means for this variant:
Normal NBN function with standard DNA double-strand break repair capacity
The Glu185 (CC) genotype produces an NBN protein with the ancestral negatively charged glutamic acid in the BRCT1 domain. This preserves optimal interaction with phosphorylated histone H2AX (gamma-H2AX) at DNA damage sites, ensuring efficient recruitment of the MRN complex and timely activation of ATM kinase checkpoint signaling.
Functional studies confirm that cells with the wild-type Glu185 show less chromosomal damage after ionizing radiation exposure compared to Gln185 variants, consistent with more efficient DSB repair. The CC genotype has not been associated with increased cancer risk in any of the large meta-analyses conducted to date.
One copy of E185Q variant -- modestly reduced DNA double-strand break repair efficiency
As a heterozygous carrier, your cells produce both Glu185 and Gln185 forms of the NBN protein. The wild-type copies maintain substantial MRN complex function, but the variant copies have altered BRCT1 domain charge that modestly reduces gamma-H2AX binding efficiency. The net effect is a small but measurable reduction in DSB repair, demonstrated by functional studies showing increased chromosomal damage after radiation in variant carriers.
The largest meta-analysis (48 studies, 17,159 cases, 22,002 controls) found no significant overall cancer risk increase for heterozygous carriers. However, site-specific analyses show modest associations with lung cancer (OR 1.21 in a dominant model), leukemia, and nasopharyngeal carcinoma. The effect is most pronounced in Asian populations and under conditions of increased DNA damage load (e.g., ionizing radiation exposure).
Importantly, this is a common variant (G allele frequency ~35% in Europeans) with a small effect size. The absolute risk increase is minimal for any individual, but the public health impact is meaningful at a population level due to the high carrier frequency.
Two copies of E185Q variant -- reduced DNA double-strand break repair efficiency
With both copies carrying Gln185, your entire pool of NBN protein has the altered electrostatic surface in the BRCT1 domain. All MRN complex recruitment to DSB sites operates with reduced gamma-H2AX binding affinity. Functional studies show that cells homozygous for the variant sustain significantly more DNA breaks after radiation compared to wild-type cells.
The clinical evidence for GG homozygotes shows the clearest associations with specific cancers. In a Chinese case-control study with meta-analysis, the homozygous variant genotype carried OR 1.40 (95% CI 1.21-1.62) for lung cancer. In a Portuguese prostate cancer cohort, GG carriers had an OR of 1.87 (95% CI 1.26-2.79) for advanced disease. For renal cell carcinoma, male patients carrying the variant allele faced a nearly four-fold increase in 5-year mortality (HR 3.92, 95% CI 1.33-11.57).
However, these are still modest effect sizes for a common variant. The absolute risk increase is small for any individual. The variant does not cause disease on its own -- it modestly shifts the probability of cancer development, especially when combined with environmental DNA-damaging exposures.
Key References
Lu et al. 2009 — meta-analysis of 16 studies (9,734 cases, 10,325 controls): NBS1 E185Q GC/CC carriers had OR 1.06 (95% CI 1.00-1.12) for overall cancer; OR 1.07 in Caucasians (95% CI 1.01-1.14)
He et al. 2014 — updated meta-analysis of 48 studies (17,159 cases, 22,002 controls): no significant overall cancer association but increased risk for leukemia, nasopharyngeal cancer, and urinary system cancers
Wang et al. 2013 — meta-analysis of 6 lung cancer studies (2,348 cases, 2,401 controls): dominant model OR 1.21 (95% CI 1.07-1.37); significant in Asians (OR 1.22) but not Caucasians
Fang et al. 2014 — Chinese case-control study plus meta-analysis: C allele carriers had OR 1.40 (95% CI 1.21-1.62) for lung cancer; functional evidence showed increased chromosomal damage after X-ray exposure in variant carriers
Silva et al. 2012 — Portuguese case-control (425 prostate cancer patients): GG genotype associated with two-fold increased risk for advanced prostate disease (OR 1.87, 95% CI 1.26-2.79)
Yao et al. 2013 — breast cancer meta-analysis of 14 studies (6,642 cases, 7,138 controls): no significant association across multiple genetic models (Gln vs Glu OR 1.05, 95% CI 0.80-1.39)