Research
Tag

Cancer Risk

66 genetic variants with this tag.

RSID Gene Description Category
rs1001179 CAT -262C>T Catalase promoter variant affecting hydrogen peroxide clearance and antioxida... Methylation & Detox Strong
rs1042602 TYR S192Y Common tyrosinase variant affecting melanin production, skin pigmentation, ta... Skin & Eyes Strong
rs17879961 CHEK2 I157T Missense variant in the CHEK2 FHA domain that impairs phosphoprotein binding ... Cancer Risk Strong
rs1041981 LTA Thr26Asn (TNFB*2) Missense variant in lymphotoxin-alpha, a TNF superfamily cytokine essential f... Innate Immunity & Infection Defense Moderate
rs10766383 NUCB2 Intronic NUCB2 variant associated with type 2 diabetes risk in females and or... Hormones & Sleep Moderate
rs1799782 XRCC1 R194W Missense variant in the linker region of XRCC1 that disrupts interaction with... Cancer Risk Strong
rs1799977 MLH1 Ile219Val Missense variant in the MLH1 ATPase domain (c.655A>G, p.Ile219Val) that subst... Gamete Quality & DNA Repair Moderate
rs10380 MTRR His595Tyr Missense variant in methionine synthase reductase that impairs B12 reactivati... Methylation & Detox Moderate
rs10848087 PIWIL1 PIWIL1 G>A (c.1128G>A) Synonymous variant in PIWIL1 associated with increased epithelial ovarian can... Fertility & Ovarian Function Emerging
rs1799793 ERCC2 D312N Missense variant in the XPD helicase that reduces nucleotide excision repair ... Cancer Risk Strong
rs10936599 TERC Near gene (3q26.2) Near-TERC regulatory variant where the minor T allele associates with shorter... Longevity & Aging Established
rs1143634 IL1B +3954C>T Synonymous exon 5 variant in IL-1β that increases IL-1β protein secretion des... TNF, NF-kB & Inflammatory Cytokines Strong
rs12203592 IRF4 T allele Regulatory variant in IRF4 enhancer affecting melanocyte pigmentation, sun se... Skin & Eyes Strong
rs1799950 BRCA1 Q356R Common missense variant near the BRCA1 RING finger domain; classified as beni... Cancer Risk Moderate
rs12350739 BNC2 Regulatory variant Intergenic enhancer variant controlling BNC2 expression in melanocytes; deter... Skin & Eyes Strong
rs1800734 MLH1 -93G>A Promoter variant in the MLH1 DNA mismatch repair gene that reduces transcript... Cancer Risk Strong
rs2303428 MSH2 Splice-region variant in MSH2 (c.2006-6T>C) located 6 bases upstream of exon ... Gamete Quality & DNA Repair Moderate
rs1136410 PARP1 Val762Ala Missense variant in the PARP1 catalytic domain that reduces enzymatic activit... Longevity & Aging Strong
rs12913832 HERC2 Intronic enhancer variant controlling OCA2 expression and determining blue ve... Skin & Eyes Established
rs1867277 FOXE1 c.-283G>A Functional 5' UTR variant in the FOXE1 thyroid transcription factor that incr... Cancer Risk Strong
rs1229984 ADH1B His48Arg ADH1B variant encoding a ~100x faster alcohol dehydrogenase enzyme, causing r... Mood & Behavior Established
rs2228000 XPC Ala499Val Missense variant in the DNA damage recognition gene XPC that moderately reduc... Cancer Risk Moderate
rs2279744 MDM2 SNP309 T>G Regulatory variant in the MDM2 promoter that increases Sp1 transcription fact... Cancer Risk Strong
rs4646903 CYP1A1 *2A (MspI, T3801C) Regulatory variant in the 3'-flanking region of CYP1A1 that increases gene in... Dental & Oral Health Moderate
rs1238574 SULT1E1 SULT1E1 intronic variant Intronic variant in SULT1E1 (estrogen sulfotransferase) associated with alter... Reproductive Hormones Emerging
rs2470890 CYP1A2 Asn516= (exon 7) Synonymous variant in CYP1A2 exon 7 in linkage disequilibrium with the *1F hi... Cancer Risk Strong
rs4987188 MSH2 Gly322Asp Missense variant in the MSH2 lever domain (c.965G>A, p.Gly322Asp) that substi... Gamete Quality & DNA Repair Moderate
rs13181 ERCC2 Lys751Gln Missense variant in the XPD helicase that reduces nucleotide excision repair ... Longevity & Aging Strong
rs1537377 CDKN2BAS CDKN2B-AS1 rs1537377 Regulatory variant in the ANRIL long non-coding RNA at the 9p21.3 locus; the ... Endometriosis & Uterine Health Strong
rs25487 XRCC1 R399Q Base excision repair scaffold protein that coordinates repair of oxidative DN... Cancer Risk Strong
rs1369481 NPAS2 Intronic variant in the brain-specific circadian transcription factor NPAS2; ... Hormones & Sleep Emerging
rs34612342 MUTYH Y179C Most common pathogenic MUTYH variant; biallelic carriers develop MUTYH-Associ... Cancer Risk Established
rs1693482 ADH1C Arg272Gln (ADH1C*1/*2) ADH1C variant defining the fast (ADH1C*1, Arg272) vs slow (ADH1C*2, Gln272) a... Mood & Behavior Strong
rs2230600 PTPN13 I1522M Missense variant in PTPN13 (FAP-1) converting Ile to Met at position 1522; th... TNF, NF-kB & Inflammatory Cytokines Moderate
rs36053993 MUTYH G396D Second most common pathogenic MUTYH variant; biallelic carriers develop MUTYH... Cancer Risk Established
rs1801516 ATM D1853N Missense variant in the ATM DNA-damage kinase associated with increased radia... Longevity & Aging Moderate
rs6983267 8q24 Intergenic enhancer variant near MYC oncogene — modestly increases colorectal... Cancer Risk Established
rs28936701 CYP1B1 R469W Pathogenic CYP1B1 missense variant (Arg469Trp) that severely reduces enzyme a... Vascular Inflammation & Remodeling Established
rs6162 CYP17A1 His46= Synonymous coding variant in CYP17A1 that tags a haplotype linked to altered ... Reproductive Hormones Moderate
rs2075570 MUC1 Near gene MTX1 intronic variant at 1q22 tagging a gastric cancer susceptibility locus t... IBD & Mucosal Immunity Strong
rs2228001 XPC Lys939Gln Missense variant in the DNA damage recognition gene XPC that reduces global-g... Fitness & Body Strong
rs2854747 IGFBP3 Intronic variant in IGFBP3 — the gene encoding the main carrier protein for I... Fat Storage & Energy Moderate
rs3820282 WNT4 Intronic variant in WNT4 on chromosome 1p36.12 that introduces a high-affinit... Endometriosis & Uterine Health Strong
rs35947132 PRF1 A91V Common perforin variant that reduces cytolytic activity by ~50%, acting as a ... Innate Immunity & Infection Defense Strong
rs3877899 SELENOP Ala234Thr Missense variant in selenoprotein P that alters selenium transport capacity; ... Vitamins & Nutrient Absorption Moderate
rs2294008 PSCA Near gene (promoter) Regulatory variant in the PSCA 5′ UTR that recruits the repressor YY1 to the ... IBD & Mucosal Immunity Strong
rs3748067 IL17A 3'UTR variant in IL-17A that alters post-transcriptional regulation via miRNA... TNF, NF-kB & Inflammatory Cytokines Moderate
rs7167936 CYP19A1 CYP19A1 intronic variant Intronic variant near the CYP19A1 promoter region, falling within MIR4713HG b... Reproductive Hormones Emerging
rs2295080 MTOR Promoter variant that reduces mTOR expression; the G allele lowers mTOR trans... Longevity & Aging Moderate
rs1934953 CYP2C8 Intronic CYP2C8 variant linked to hypertension susceptibility, COPD risk, and... Pharmacogenomics Emerging
rs2536 MTOR 3'UTR variant that alters miR-150 binding affinity; the C allele increases mi... Longevity & Aging Moderate
rs4648127 NFKB1 NFKB1 intronic variant Rare protective intronic variant in the master immune transcription factor NF... Innate Immunity & Infection Defense Moderate
rs72709458 TERT Intronic TERT variant that increases uterine fibroid (leiomyoma) risk Endometriosis & Uterine Health Strong
rs2031920 CYP2E1 *5B (RsaI) Promoter variant increasing CYP2E1 inducibility, elevating oxidative stress f... Pharmacogenomics Moderate
rs2736100 TERT Common intron 2 variant in the telomerase gene that influences telomere lengt... Longevity & Aging Strong
rs2811712 CDKN2BAS Regulatory variant in the ANRIL long non-coding RNA at the 9p21.3 locus that ... Longevity & Aging Moderate
rs9383935 CCDC170 3' UTR variant in CCDC170 at the 6q25.1 estrogen-signaling locus; the T allel... Endometriosis & Uterine Health Moderate
rs2740574 CYP3A4 *1B -392A>G Promoter variant affecting CYP3A4 expression, most common in African populations Pharmacogenomics Moderate
rs4975605 TERT Intronic TERT variant influencing telomere maintenance, associated with testi... Longevity & Aging Moderate
rs3776467 MTRR Intronic MTRR variant with sex-specific association with DNA methylation patt... Methylation & Detox Emerging
rs564398 CDKN2B-AS1 Secondary T2D risk variant at the 9p21 CDKN2A/B locus within ANRIL (CDKN2B-AS... Blood Sugar & Diabetes Moderate
rs7675998 NAF1 Regulatory variant near the NAF1 telomerase assembly gene associated with sho... Longevity & Aging Strong
rs965513 FOXE1 Strongest GWAS thyroid locus — regulatory variant near FOXE1 affecting thyroi... Hormones & Sleep Strong
rs9420907 OBFC1 Intronic variant in the CST complex component STN1/OBFC1 that influences telo... Longevity & Aging Strong
rs828903 MTHFD2 Intronic variant in the mitochondrial folate enzyme MTHFD2, influencing one-c... Methylation & Detox Moderate
rs8192780 CYP2E1 Downstream regulatory variant near CYP2E1 associated with nasopharyngeal carc... Pharmacogenomics Emerging