rs76723693 — G6PD G6PD Nefza (c.968T>C)
Missense variant in glucose-6-phosphate dehydrogenase causing Class III G6PD deficiency (~50% residual enzyme activity), associated with hemolytic anemia triggered by fava beans, infections, and specific drugs
Details
- Gene
- G6PD
- Chromosome
- X
- Risk allele
- G
- Clinical
- Pathogenic
- Evidence
- Strong
Population Frequency
Tags
Category
Blood Sugar & DiabetesSee your personal result for G6PD
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G6PD Nefza: A Rare Enzyme Deficiency That Makes Ordinary Drugs and Foods Dangerous
Glucose-6-phosphate dehydrogenase (G6PD) is a housekeeping enzyme that every cell
carries, but it matters most in red blood cells — which have no mitochondria and
therefore depend on G6PD as their sole source of NADPH11 NADPH
Nicotinamide adenine
dinucleotide phosphate (reduced form), a cellular reducing agent essential for
regenerating glutathione and neutralizing oxidative stress.
NADPH is the fuel that keeps the antioxidant defense of red blood cells running. When
G6PD activity is significantly reduced, oxidative stress from drugs, infections, or
certain foods overwhelms the red cell's defenses, causing the cell membrane to rupture —
a process called acute hemolytic anemia22 acute hemolytic anemia
Sudden, triggered destruction of red blood
cells causing jaundice, dark urine, fatigue, and anemia.
The rs76723693 G allele creates the G6PD Nefza variant, a missense change (c.968T>C)
that substitutes leucine with proline at position 323 of the enzyme. Proline's rigid
ring structure disrupts local protein folding, reducing enzyme stability and activity
to approximately 50% of normal. This variant was first characterized in Tunisian
patients33 first characterized in Tunisian
patients
Benmansour et al. 2013, Blood Cells Mol Dis; 293 G6PD-deficient
individuals across familial and asymptomatic cases
and is classified by the WHO as a Class III G6PD deficiency variant — mild to
moderate, with residual activity in the 10–60% range. G6PD deficiency is the most
common human enzymopathy, affecting more than 400 million people
worldwide44 affecting more than 400 million people
worldwide, distributed across Africa,
the Mediterranean, Middle East, and South and East Asia in patterns that mirror historic
malaria endemicity — the G6PD-deficient red cell is less hospitable to Plasmodium
parasites, conferring selective advantage in malaria-endemic regions.
The Mechanism
G6PD catalyzes the first step of the pentose phosphate pathway, converting glucose-6-phosphate
to 6-phosphogluconate while reducing NADP⁺ to NADPH. In red blood cells, this NADPH
is the only means of regenerating glutathione55 glutathione
The cell's primary intracellular
antioxidant; G6PD deficiency depletes reduced glutathione, leaving hemoglobin and the
cell membrane vulnerable to oxidative damage.
When NADPH falls below a critical threshold — triggered by oxidative challenge from
drugs, fava bean ingestion (which liberates vicine and convicine, potent oxidants), or
febrile infection — unprotected hemoglobin forms Heinz bodies66 Heinz bodies
Precipitates of
denatured hemoglobin that attach to the red cell membrane and accelerate its removal
by the spleen and the cell is destroyed.
The Leu323Pro substitution in G6PD Nefza reduces enzyme stability and substrate
affinity for both glucose-6-phosphate and NADP⁺, confirmed in functional
studies77 confirmed in functional
studies showing approximately 50% residual
activity relative to the wild-type enzyme.
Because the G6PD gene is on the X chromosome, the variant is X-linked: males carrying
the G allele are hemizygous and express the full deficiency phenotype. Females with
one G allele are carriers and may have partial deficiency depending on
X-chromosome inactivation patterns88 X-chromosome inactivation patterns
Random silencing of one X chromosome in each
female cell; if the wild-type allele is preferentially silenced (skewed inactivation),
a heterozygous female can have enzyme activity as low as a hemizygous male.
The Evidence
The G6PD Nefza variant (c.968T>C) alone produces approximately 50% residual enzyme
activity — biochemical analysis by Ramírez-Nava et al. 201799 biochemical analysis by Ramírez-Nava et al. 2017
Biochemical Analysis
of Two Single Mutants that Give Rise to a Polymorphic G6PD A-Double Mutant. Int J
Mol Sci, 2017 showed that Leu323Pro is
the functionally dominant destabilizing mutation. This variant frequently co-occurs
in cis with a second mutation, c.376A>G (p.Asn126Asp), forming the G6PD Betica-Selma
complex allele with more severe enzyme dysfunction and pathogenic hemolytic anemia
(ClinVar variation 1065168). The c.968T>C single variant is classified in ClinVar as
Pathogenic/Likely pathogenic with 17/21 submissions in agreement.
An important and underappreciated clinical consequence of G6PD deficiency is its
effect on HbA1c measurements. Because G6PD-deficient red cells have a shorter
lifespan, hemoglobin has less time to become glycated, producing
systematically lower HbA1c readings despite normal or elevated blood glucose levels1010 systematically lower HbA1c readings despite normal or elevated blood glucose levels
Nature Medicine 2024 found that G6PDdef carriers showed significantly higher glucose
but lower HbA1c during the pre-diabetes period, and accounted for 12% of diabetic
retinopathy and 9% of neuropathy cases in African ancestry participants of the ACCORD
trial. This diagnostic gap means G6PD-deficient
individuals can meet diabetes diagnostic thresholds by blood glucose criteria while
appearing pre-diabetic by HbA1c — a clinically dangerous misclassification that delays
treatment and intensification of therapy.
Practical Actions
The primary goal for G6PD Nefza carriers is avoiding oxidative triggers. The most
evidence-supported prohibitions are seven drugs with solid evidence for hemolysis
induction1111 seven drugs with solid evidence for hemolysis
induction
Youngster et al. 2010, Drug Safety, evidence-based review of MEDLINE,
PubMed, Cochrane: primaquine, dapsone,
rasburicase, nitrofurantoin, methylene blue, phenazopyridine, and toluidine blue.
Fava beans (broad beans, Vicia faba) and their pollen must also be avoided — the
pyrimidine glycosides vicine and convicine undergo oxidative metabolism that overwhelms
G6PD-deficient red cells. Hemolytic episodes triggered by infection are common and
typically self-limiting, but severe episodes require urgent medical evaluation.
For diabetes screening and management, carriers should request fasting plasma glucose or a 2-hour oral glucose tolerance test (OGTT) rather than relying on HbA1c alone. If HbA1c is used, clinicians should apply a genotype-adjusted threshold — current evidence supports treating an HbA1c reading as representing meaningfully higher true glycemic exposure than the number suggests.
Interactions
The rs76723693 G allele can occur in cis with rs2230037 (G6PD c.376A>G, p.Asn126Asp), forming the G6PD Betica-Selma double mutant (ClinVar 1065168). This compound allele causes more severe enzyme deficiency and a higher risk of nonspherocytic hemolytic anemia than either mutation alone. Individuals who test positive for rs76723693 should ideally have both variants assessed to determine whether the compound allele is present.
The HbA1c interference from G6PD deficiency interacts critically with common diabetes screening pathways that rely exclusively on HbA1c — an important interaction with variants in the glycation and hemoglobin pathway. Concurrent hemoglobinopathies (e.g., sickle cell trait, thalassemia) further complicate HbA1c reliability and may compound the interpretation challenge.
Drug Interactions
Genotype Interpretations
What each possible genotype means for this variant:
Normal G6PD enzyme activity — no hemolytic risk from this variant
You carry the A allele, the wild-type form of the G6PD gene at this position. Your glucose-6-phosphate dehydrogenase enzyme activity is unaffected by this variant, and your red blood cells can mount a normal antioxidant response under oxidative stress from drugs, infections, or foods. The vast majority of people worldwide carry this allele — the G6PD Nefza (c.968T>C) variant is rare globally, found predominantly in populations of North African (Tunisian) and Latin American ancestry at frequencies of 0.2–0.3%.
G6PD Nefza variant causing Class III enzyme deficiency with hemolytic risk under oxidative stress
G6PD Nefza reduces enzyme stability and substrate affinity, leaving red blood cells with approximately half the normal capacity to regenerate NADPH from NADP⁺. NADPH is the only antioxidant "fuel" available to red blood cells (which lack mitochondria and cannot run the TCA cycle). When oxidative stress exceeds NADPH regeneration capacity, reduced glutathione is depleted, hemoglobin is oxidized and forms Heinz bodies, and the red cell membrane is destroyed — a hemolytic crisis.
Symptoms of an acute hemolytic episode include sudden pallor, jaundice (yellow skin/eyes), dark or tea-colored urine (from hemoglobin in the urine), fatigue, rapid heart rate, and shortness of breath. Severe episodes can require blood transfusion; most Class III episodes self-resolve once the trigger is removed, but this should always be assessed by a physician.
An underappreciated consequence is falsely low HbA1c. Because G6PD-deficient red cells have shorter lifespans, hemoglobin accumulates less glycation, producing HbA1c readings that are lower than true average blood glucose would predict. A 2024 Nature Medicine study (PMID 38918629) found G6PD deficiency significantly increased the risk of diabetic retinopathy and neuropathy at equivalent HbA1c levels, attributable to undetected hyperglycemia masked by low measured HbA1c.
The Nefza variant can also occur together with a second G6PD variant (c.376A>G, rs2230037) on the same chromosome, forming the G6PD Betica-Selma allele with more severe enzyme deficiency and higher risk of nonspherocytic hemolytic anemia. If you carry rs76723693, testing for rs2230037 is recommended to determine if the compound allele is present.