|
rs10010131
|
WFS1
WFS1 Intron 4 T2D Risk Variant
|
Intronic variant in WFS1 (wolframin) on chromosome 4q22, one of the earliest ...
|
Blood Sugar & Diabetes
|
|
Strong
|
|
rs10305420
|
GLP1R
Pro7Leu
|
GLP-1 receptor signal peptide variant that enhances semaglutide and tirzepati...
|
Pharmacogenomics
|
|
Moderate
|
|
rs10195252
|
GRB14/COBLL1
|
Intergenic variant between GRB14 and COBLL1 that acts as an eQTL for GRB14 in...
|
Blood Sugar & Diabetes
|
|
Strong
|
|
rs10305492
|
GLP1R
A316T
|
Rare protective missense variant in the GLP-1 receptor associated with lower ...
|
Pharmacogenomics
|
|
Strong
|
|
rs10278336
|
YKT6
GCK-Region Intronic Variant
|
Intronic variant in YKT6 immediately downstream of GCK; the A allele is a GWA...
|
Blood Sugar & Diabetes
|
|
Moderate
|
|
rs10515237
|
PCSK1
PCSK1 A/G (rs10515237)
|
Intronic variant in PCSK1 that tags the Q665E-S690T functional haplotype, red...
|
Appetite & Obesity
|
|
Moderate
|
|
rs1042044
|
GLP1R
Leu260Phe
|
GLP-1 receptor variant in intracellular loop 2 that alters receptor surface e...
|
Pharmacogenomics
|
|
Moderate
|
|
rs10423928
|
GIPR
|
Intronic GIPR variant that reduces functional GIP receptor expression via alt...
|
Blood Sugar & Diabetes
|
|
Strong
|
|
rs1063537
|
ADIPOQ
|
3'UTR variant in ADIPOQ that modulates adiponectin mRNA stability; the common...
|
Fat Storage & Energy
|
|
Moderate
|
|
rs10766383
|
NUCB2
|
Intronic NUCB2 variant associated with type 2 diabetes risk in females and or...
|
Hormones & Sleep
|
|
Moderate
|
|
rs10767664
|
BDNF
|
Obesity GWAS locus in a conserved BDNF enhancer - reduces hypothalamic BDNF e...
|
Appetite & Obesity
|
|
Strong
|
|
rs1044498
|
ENPP1
K121Q
|
ENPP1 K121Q variant that increases ENPP1 binding affinity to the insulin rece...
|
Blood Sugar & Diabetes
|
|
Strong
|
|
rs10830963
|
MTNR1B
Intron C>G
|
Melatonin receptor variant that extends nighttime melatonin signaling in panc...
|
Hormones & Sleep
|
|
Established
|
|
rs104894005
|
GCK
Glu279Ter (MODY2)
|
Pathogenic glucokinase nonsense variant introducing a premature stop codon th...
|
Blood Sugar & Diabetes
|
|
Established
|
|
rs10865710
|
PPARG
PPARG C-681G
|
PPARG promoter-region enhancer variant that reduces PPARgamma expression, inc...
|
Fat Storage & Energy
|
|
Moderate
|
|
rs10938397
|
GNPDA2
|
GIANT consortium GWAS obesity locus near GNPDA2 — affects hexosamine-pathway-...
|
Appetite & Obesity
|
|
Strong
|
|
rs11212617
|
ATM
|
Intronic variant near the ATM gene affecting metformin's activation of AMPK; ...
|
Longevity & Aging
|
|
Moderate
|
|
rs104894007
|
GCK
Thr228Met (MODY2)
|
Pathogenic glucokinase missense variant that nearly abolishes enzyme activity...
|
Blood Sugar & Diabetes
|
|
Established
|
|
rs10882283
|
RBP4
RBP4 rs10882283
|
5' UTR variant in RBP4 that influences expression of retinol binding protein ...
|
Fat Storage & Energy
|
|
Moderate
|
|
rs11037909
|
EXT2
|
Intronic EXT2 variant associated with a modest increase in type 2 diabetes su...
|
Appetite & Obesity
|
|
Moderate
|
|
rs104894008
|
GCK
Gly261Arg (MODY2)
|
Pathogenic glucokinase missense variant that nearly abolishes enzyme activity...
|
Blood Sugar & Diabetes
|
|
Established
|
|
rs11061937
|
ADIPOR2
ADIPOR2 rs11061937
|
Intronic ADIPOR2 variant associated with cardiovascular disease risk in indiv...
|
Fat Storage & Energy
|
|
Moderate
|
|
rs1137101
|
LEPR
Q223R (Gln223Arg)
|
Common leptin receptor variant in the leptin-binding domain affecting satiety...
|
Hormones & Sleep
|
|
Moderate
|
|
rs104894009
|
GCK
Arg191Trp (MODY2)
|
Pathogenic glucokinase missense variant that raises the beta-cell glucose sen...
|
Blood Sugar & Diabetes
|
|
Established
|
|
rs11061946
|
ADIPOR2
|
Intronic variant in the adiponectin receptor 2 gene; rare homozygotes showed ...
|
Fat Storage & Energy
|
|
Emerging
|
|
rs104894011
|
GCK
Glu265Lys (MODY2)
|
Pathogenic glucokinase missense variant causing MODY2 — mild, stable fasting ...
|
Blood Sugar & Diabetes
|
|
Established
|
|
rs12640088
|
PPARGC1A
|
Intronic variant in PPARGC1A that may modulate PGC-1alpha expression and mito...
|
Fitness & Body
|
|
Emerging
|
|
rs10811661
|
CDKN2B
|
Regulatory variant upstream of CDKN2A/CDKN2B at the 9p21 locus; the T risk al...
|
Blood Sugar & Diabetes
|
|
Strong
|
|
rs1205
|
CRP
+1846C>T
|
3' UTR variant that modulates baseline C-reactive protein levels and inflamma...
|
Vascular Inflammation & Remodeling
|
|
Strong
|
|
rs10885122
|
ADRA2A
ADRA2A Beta-Cell cAMP Variant
|
Intergenic variant near ADRA2A that modulates alpha-2A adrenergic receptor ex...
|
Blood Sugar & Diabetes
|
|
Moderate
|
|
rs1152003
|
PPARG
|
PPARG 3'-flanking region variant — the G allele independently tags a PPARG re...
|
Fat Storage & Energy
|
|
Emerging
|
|
rs11605924
|
CRY2
Intron Variant
|
Circadian clock gene variant affecting fasting glucose, hepatic lipid metabol...
|
Hormones & Sleep
|
|
Strong
|
|
rs13407913
|
ADCY3
|
Intronic variant in the adenylyl cyclase 3 gene, which encodes a cAMP-produci...
|
Fitness & Body
|
|
Emerging
|
|
rs2972164
|
PPARG
|
Intronic PPARG variant associated with rate of change in insulin sensitivity ...
|
Liver Fat
|
|
Moderate
|
|
rs10885406
|
TCF7L2
TCF7L2 Wnt Signaling Depth Variant
|
Intronic TCF7L2 variant tagging the diabetes-risk haplotype and associated wi...
|
Blood Sugar & Diabetes
|
|
Moderate
|
|
rs11590235
|
SKI
|
TGF-beta signaling regulator variant identified as the top shared locus betwe...
|
Cardiomyopathy & Structural Heart
|
|
Moderate
|
|
rs116862713
|
PRKAB1
|
Rare AMPK beta-1 subunit variant linking central energy sensing to shared mig...
|
Fat Storage & Energy
|
|
Emerging
|
|
rs1501299
|
ADIPOQ
+276G>T
|
Intronic variant in the adiponectin gene that influences circulating adiponec...
|
Coronary Artery Disease & Atherosclerosis
|
|
Moderate
|
|
rs17166496
|
FSTL4
FSTL4 rs17166496
|
Intronic variant in FSTL4 (Follistatin-Like 4) on chromosome 5q31; heterozygo...
|
Appetite & Obesity
|
|
Emerging
|
|
rs10954640
|
ENPP1
ENPP1 3'UTR Variant
|
Intergenic variant near ENPP1-associated regulatory loci; T allele is associa...
|
Blood Sugar & Diabetes
|
|
Emerging
|
|
rs1175540
|
PPARG
PPARG rs1175540
|
Intronic PPARG variant associated with differential weight loss response to c...
|
Fat Storage & Energy
|
|
Moderate
|
|
rs17782313
|
MC4R
Near-gene C>T
|
Intergenic variant 188kb downstream of MC4R affecting appetite regulation, me...
|
Appetite & Obesity
|
|
Strong
|
|
rs1111875
|
HHEX
HHEX/IDE locus T2D risk variant
|
Primary tag SNP at the HHEX/IDE locus on chromosome 10q23, one of the earlies...
|
Blood Sugar & Diabetes
|
|
Established
|
|
rs1175543
|
PPARG
PPARG rs1175543
|
Intronic PPARG variant in strong linkage disequilibrium with rs709158; the G ...
|
Fat Storage & Energy
|
|
Emerging
|
|
rs1143699
|
PTPRS
PTPRS C/T (rs1143699)
|
Synonymous PTPRS variant associated with increased type 2 diabetes risk in me...
|
Blood Sugar & Diabetes
|
|
Moderate
|
|
rs1175544
|
PPARG
PPARG rs1175544
|
Intronic PPARG variant that accounts for ~7% of individual variation in body ...
|
Fat Storage & Energy
|
|
Emerging
|
|
rs1841499
|
NEGR1
|
Hypothalamic appetite regulator variant linking obesity susceptibility to mig...
|
Appetite & Obesity
|
|
Moderate
|
|
rs563694
|
ABCB11
G6PC2/ABCB11 fasting glucose locus
|
Intronic variant in ABCB11 in strong linkage disequilibrium with G6PC2 regula...
|
Liver Fat
|
|
Strong
|
|
rs11558471
|
SLC30A8
SLC30A8 Zinc Transport Depth Variant
|
3-prime UTR variant in the SLC30A8 zinc transporter gene that alters ZnT8 mRN...
|
Blood Sugar & Diabetes
|
|
Strong
|
|
rs11868035
|
SREBF1
|
SREBF1 intronic/3'UTR variant affecting SREBP-1c expression, associated with ...
|
Fat Storage & Energy
|
|
Moderate
|
|
rs184660829
|
DENND2C
|
Rare intronic variant near a DENND2C splice site associated with an 8-fold in...
|
Appetite & Obesity
|
|
Moderate
|
|
rs1169288
|
HNF1A
HNF1A Ile27Leu
|
Common coding variant in the HNF1A transcription factor dimerization domain t...
|
Blood Sugar & Diabetes
|
|
Strong
|
|
rs16847897
|
TERC
|
Regulatory variant at the TERC locus associated with shorter telomeres and ac...
|
Longevity & Aging
|
|
Strong
|
|
rs17697419
|
VEGFC
|
Intronic variant in the primary lymphangiogenesis growth factor gene; the min...
|
Vascular Inflammation & Remodeling
|
|
Moderate
|
|
rs11705701
|
IGF2BP2
IGF2BP2 Insulin Signaling Variant
|
Upstream regulatory variant in IGF2BP2 that shifts mRNA isoform balance in ad...
|
Blood Sugar & Diabetes
|
|
Moderate
|
|
rs12304921
|
SLC11A2
|
Intronic variant in SLC11A2 (DMT1), the primary intestinal iron transporter, ...
|
Fat Storage & Energy
|
|
Emerging
|
|
rs17697515
|
VEGFC
|
Intronic VEGFC variant independently associated with reduced diabetic retinop...
|
Vascular Inflammation & Remodeling
|
|
Moderate
|
|
rs28647808
|
ADAMTS13
Pro618Ala
|
Missense variant in the spacer domain of ADAMTS13 that reduces VWF-cleaving p...
|
Von Willebrand & Anticoagulant Proteins
|
|
Moderate
|
|
rs11708067
|
ADCY5
ADCY5 Glucose Signaling Variant
|
Intronic regulatory variant that reduces ADCY5 expression in pancreatic islet...
|
Blood Sugar & Diabetes
|
|
Strong
|
|
rs12490265
|
PPARG
PPARG Intronic Haplotype Variant
|
Intronic PPARG variant in a metabolic syndrome–associated haplotype block; th...
|
Fat Storage & Energy
|
|
Emerging
|
|
rs193922339
|
GCK
|
Likely-pathogenic GCK missense variant (p.Phe316Tyr) causing glucokinase loss...
|
Metabolic Enzymes & Rare Disorders
|
|
Strong
|
|
rs231806
|
CTLA4
|
Upstream regulatory variant in the CTLA4 MH30 region associated with latent a...
|
Autoimmune Tolerance & T-Cell Regulation
|
|
Emerging
|
|
rs12243326
|
TCF7L2
TCF7L2 Incretin Response Depth Variant
|
Intronic TCF7L2 depth variant replicated across multiple populations as a sec...
|
Blood Sugar & Diabetes
|
|
Moderate
|
|
rs12636454
|
PPARG
PPARG rs12636454
|
Intronic PPARG variant associated with modest reduction in type 2 diabetes ri...
|
Fat Storage & Energy
|
|
Emerging
|
|
rs1805097
|
IRS2
Gly1057Asp
|
Missense IRS2 variant where Asp/Asp homozygotes are twice as likely to reach ...
|
Longevity & Aging
|
|
Moderate
|
|
rs12255372
|
TCF7L2
|
Second TCF7L2 diabetes variant - compounds risk with rs7903146
|
Blood Sugar & Diabetes
|
|
Strong
|
|
rs1800872
|
IL10
-592 C>A
|
Promoter variant affecting IL-10 production — a key anti-inflammatory cytokin...
|
Vascular Inflammation & Remodeling
|
|
Strong
|
|
rs2867125
|
TMEM18
TMEM18 regulatory variant (2p25.3)
|
Regulatory variant at the TMEM18 locus on chromosome 2p25.3 — one of the most...
|
Appetite & Obesity
|
|
Strong
|
|
rs12610022
|
INSR
|
Intronic INSR variant that may alter insulin receptor expression or isoform b...
|
Blood Sugar & Diabetes
|
|
Emerging
|
|
rs16861194
|
ADIPOQ
-11426A>G
|
Upstream promoter variant that reduces ADIPOQ transcription, lowering circula...
|
Fat Storage & Energy
|
|
Moderate
|
|
rs1799941
|
SHBG
|
Promoter region variant affecting sex hormone-binding globulin levels, with t...
|
Hormones & Sleep
|
|
Strong
|
|
rs738409
|
PNPLA3
I148M
|
Strongest genetic risk factor for non-alcoholic fatty liver disease, progress...
|
Liver Fat
|
|
Established
|
|
rs13266634
|
SLC30A8
Arg325Trp (C>T)
|
Zinc transporter 8 variant affecting zinc loading into insulin granules, infl...
|
Blood Sugar & Diabetes
|
|
Established
|
|
rs1800624
|
AGER
-374T/A
|
Promoter variant in the AGER gene that increases RAGE transcription approxima...
|
Hormones & Sleep
|
|
Moderate
|
|
rs1800795
|
IL6
-174G/C
|
Promoter variant controlling interleukin-6 expression — affects inflammation,...
|
Fitness & Body
|
|
Strong
|
|
rs3087243
|
CTLA4
CT60
|
Immune checkpoint regulatory variant in the 3'UTR affecting T-cell activation...
|
Autoimmune Tolerance & T-Cell Regulation
|
|
Strong
|
|
rs780094
|
GCKR
|
Intronic GCKR variant in strong LD with the coding P446L substitution (rs1260...
|
Liver Fat
|
|
Strong
|
|
rs13429458
|
THADA
THADA PCOS/T2D Variant
|
Intronic variant in THADA, a gene encoding a calcium channel-regulating prote...
|
Blood Sugar & Diabetes
|
|
Moderate
|
|
rs1800625
|
AGER
AGER -429T>C
|
Promoter variant at position -429 in the AGER gene that increases RAGE transc...
|
Hormones & Sleep
|
|
Moderate
|
|
rs137853334
|
HNF4A
HNF4A MODY1 Variant
|
Pathogenic nonsense variant in HNF4A causing MODY1 — a progressive, autosomal...
|
Blood Sugar & Diabetes
|
|
Established
|
|
rs17036314
|
PPARG
|
Intronic PPARG variant — carriers of the C allele have elevated fasting gluco...
|
Fat Storage & Energy
|
|
Moderate
|
|
rs1402837
|
G6PC2
G6PC2 Fasting Glucose Variant
|
Upstream regulatory variant in G6PC2 that modulates pancreatic beta-cell gluc...
|
Blood Sugar & Diabetes
|
|
Strong
|
|
rs17300539
|
ADIPOQ
-11391G>A
|
Promoter variant affecting adiponectin secretion and metabolic syndrome risk
|
Fat Storage & Energy
|
|
Strong
|
|
rs1495377
|
TSPAN8
|
Intronic variant in TSPAN8 (Tetraspanin 8) associated with reduced insulin se...
|
Blood Sugar & Diabetes
|
|
Strong
|
|
rs1884614
|
HNF4A
HNF4A P2 Promoter rs1884614
|
Intronic variant tagging the HNF4A P2 promoter risk haplotype; the T allele i...
|
Hormones & Sleep
|
|
Moderate
|
|
rs1537373
|
CDKN2B-AS1
ANRIL T2D/Cardiovascular Variant
|
Regulatory intronic variant within ANRIL (CDKN2B-AS1) at the 9p21.3 locus; th...
|
Blood Sugar & Diabetes
|
|
Strong
|
|
rs1562444
|
MTNR1B
MTNR1B 3'UTR Melatonin Signaling Variant
|
Regulatory 3'UTR variant in the melatonin receptor 1B gene that affects MTNR1...
|
Blood Sugar & Diabetes
|
|
Moderate
|
|
rs1800849
|
UCP3
-55C>T
|
Promoter variant in skeletal muscle uncoupling protein 3 that increases UCP3 ...
|
Fat Storage & Energy
|
|
Moderate
|
|
rs1571583
|
GLIS3
GLIS3 Beta Cell Development Variant
|
Intronic GLIS3 variant in which the rare A allele modestly elevates TSH, refl...
|
Blood Sugar & Diabetes
|
|
Strong
|
|
rs1801282
|
PPARG
Pro12Ala
|
Insulin sensitivity - affects how well your cells respond to insulin
|
Fat Storage & Energy
|
|
Established
|
|
rs1934963
|
CYP2C9
|
Deep intronic CYP2C9 variant associated with altered drug response to sulfony...
|
Pharmacogenomics
|
|
Emerging
|
|
rs16989673
|
PTPN1
1484insG
|
A guanine duplication in the 3'-UTR of PTPN1 (PTP1B) that increases mRNA stab...
|
Blood Sugar & Diabetes
|
|
Moderate
|
|
rs182052
|
ADIPOQ
ADIPOQ promoter -10066A>G
|
Intronic/promoter-region ADIPOQ variant where the A allele reduces circulatin...
|
Fat Storage & Energy
|
|
Strong
|
|
rs1862513
|
RETN
-420C>G
|
Promoter variant that increases resistin expression via Sp1/Sp3 transcription...
|
Fat Storage & Energy
|
|
Moderate
|
|
rs1799817
|
INSR
His1085His
|
Synonymous variant in the tyrosine kinase domain of the insulin receptor; the...
|
Blood Sugar & Diabetes
|
|
Moderate
|
|
rs2144908
|
HNF4A
HNF4A P2 Block rs2144908
|
Intronic HNF4A P2 promoter haplotype tag variant; carriers have modestly impa...
|
Hormones & Sleep
|
|
Moderate
|
|
rs2241767
|
ADIPOQ
+349A>G
|
Intronic variant in the adiponectin gene associated with lower circulating ad...
|
Fat Storage & Energy
|
|
Moderate
|
|
rs1799999
|
PPP1R3A
Asp905Tyr
|
Missense variant in the skeletal muscle glycogen-targeting subunit of protein...
|
Blood Sugar & Diabetes
|
|
Moderate
|
|
rs2279525
|
PPARGC1A
PPARGC1A 3' UTR metabolic association variant
|
3' UTR variant in the PGC-1alpha gene that may alter PPARGC1A mRNA stability ...
|
Fat Storage & Energy
|
|
Emerging
|
|
rs62408925
|
NCK1
|
Intergenic regulatory variant near NCK1 at 3q22.3; in strong linkage disequil...
|
Appetite & Obesity
|
|
Moderate
|
|
rs1800961
|
HNF4A
Thr130Ile
|
Missense variant in HNF4A causing hepatocyte-specific loss of transcriptional...
|
Blood Sugar & Diabetes
|
|
Moderate
|
|
rs2297508
|
SREBF1
SREBF1 G952G
|
SREBF1 3' UTR variant that subtly impairs SREBP-1c function, increasing risk ...
|
Fat Storage & Energy
|
|
Moderate
|
|
rs2764264
|
FOXO3
|
Intronic FOXO3 variant that disrupts an NKX3 transcription factor binding sit...
|
Longevity & Aging
|
|
Strong
|
|
rs6548238
|
TMEM18
|
Second strongest obesity GWAS locus after FTO - influences hypothalamic appet...
|
Appetite & Obesity
|
|
Strong
|
|
rs1801278
|
IRS1
Gly972Arg (G972R)
|
Missense variant in insulin receptor substrate 1 that impairs tyrosine phosph...
|
Blood Sugar & Diabetes
|
|
Strong
|
|
rs6947337
|
INHBA
|
Activin A signaling variant near INHBA linking adipocyte dysfunction to share...
|
Appetite & Obesity
|
|
Moderate
|
|
rs1884613
|
HNF4A
HNF4A P2 Promoter T2D Variant
|
Intronic variant tagging the HNF4A P2 promoter risk haplotype; the G allele s...
|
Blood Sugar & Diabetes
|
|
Moderate
|
|
rs2802292
|
FOXO3
|
Longevity-associated intronic enhancer variant with 1.9-fold increased probab...
|
Longevity & Aging
|
|
Established
|
|
rs696217
|
GHRL
Leu72Met
|
Missense variant in the ghrelin prepropeptide that impairs postprandial ghrel...
|
Appetite & Obesity
|
|
Moderate
|
|
rs193922485
|
HNF1B
|
Rare HNF1B splice-region intronic variant of uncertain significance, found ne...
|
Blood Sugar & Diabetes
|
|
Emerging
|
|
rs193929374
|
GCK
GCK Ala378Val (MODY2)
|
Pathogenic missense variant in glucokinase that raises the glucose set-point ...
|
Blood Sugar & Diabetes
|
|
Established
|
|
rs266729
|
ADIPOQ
-11391G>C
|
Promoter variant reducing adiponectin transcription, increasing T2D, NAFLD, a...
|
Fat Storage & Energy
|
|
Strong
|
|
rs7498665
|
SH2B1
Thr484Ala
|
Obesity GWAS missense variant in SH2B1 that impairs leptin signaling and incr...
|
Appetite & Obesity
|
|
Strong
|
|
rs2059807
|
INSR
INSR intronic variant
|
Intronic INSR variant associated with PCOS susceptibility and metabolic syndr...
|
Blood Sugar & Diabetes
|
|
Moderate
|
|
rs4235308
|
PPARGC1A
|
Intronic variant in the PGC-1alpha gene linked to population-specific type 2 ...
|
Fitness & Body
|
|
Emerging
|
|
rs2229431
|
INSR
|
Synonymous exon 13 variant in the insulin receptor gene; the A allele has bee...
|
Blood Sugar & Diabetes
|
|
Emerging
|
|
rs2920502
|
PPARG
PPARG rs2920502
|
Intronic PPARG variant associated with body fat percentage, impaired glucose ...
|
Fat Storage & Energy
|
|
Moderate
|
|
rs2233580
|
PAX4
Arg192His
|
Missense variant that impairs PAX4's ability to repress insulin and glucagon ...
|
Blood Sugar & Diabetes
|
|
Strong
|
|
rs2289669
|
SLC47A1
MATE1 G-1853A
|
Intronic variant in MATE1, the renal and hepatic metformin efflux transporter...
|
Pharmacogenomics
|
|
Moderate
|
|
rs2237886
|
KCNQ1
KCNQ1 Potassium Channel Diabetes Variant
|
Intronic variant in KCNQ1's imprinted region, tagging the same LD block as es...
|
Blood Sugar & Diabetes
|
|
Moderate
|
|
rs358806
|
WNT5A
|
Regulatory variant near WNT5A linked to type 2 diabetes risk via impaired Wnt...
|
Fat Storage & Energy
|
|
Moderate
|
|
rs2268574
|
GCK
c.679+38T>G
|
Intronic GCK variant 38 bp downstream of exon 7; the A allele (GRCh38 referen...
|
Blood Sugar & Diabetes
|
|
Emerging
|
|
rs3734254
|
PPARD
T+294C
|
PPARD 3'UTR variant that reduces fatty acid oxidation capacity and blunts the...
|
Fat Storage & Energy
|
|
Moderate
|
|
rs2295490
|
TRIB3
Q84R
|
TRIB3 pseudokinase missense variant that increases Akt inhibition, impairing ...
|
Blood Sugar & Diabetes
|
|
Strong
|
|
rs3745012
|
LPIN2
LPIN2 3'UTR variant
|
3' UTR regulatory variant in LPIN2 (lipin 2) that alters fat distribution and...
|
Fat Storage & Energy
|
|
Moderate
|
|
rs2466293
|
SLC30A8
SLC30A8 Islet Zinc Regulation Variant
|
3'UTR variant in the zinc transporter ZnT8 gene that disrupts miRNA binding s...
|
Blood Sugar & Diabetes
|
|
Moderate
|
|
rs9939609
|
FTO
Intron 1 T>A
|
The most strongly replicated obesity-associated variant, affecting body weigh...
|
Appetite & Obesity
|
|
Established
|
|
rs2758151
|
SGK1
|
Regulatory tagging SNP near SGK1 (serum/glucocorticoid regulated kinase 1) — ...
|
Blood Sugar & Diabetes
|
|
Moderate
|
|
rs290475
|
TCF7L2
TCF7L2 Beta Cell Function Depth Variant
|
Intronic TCF7L2 variant tagging a distinct haplotype with emerging evidence f...
|
Blood Sugar & Diabetes
|
|
Emerging
|
|
rs3856806
|
PPARG
His477His (C1431T)
|
Synonymous PPARG variant where the T allele reduces type 2 diabetes risk and ...
|
Fat Storage & Energy
|
|
Strong
|
|
rs2943641
|
IRS1
Near-gene C>T
|
Regulates insulin signaling efficiency and cellular glucose uptake
|
Blood Sugar & Diabetes
|
|
Strong
|
|
rs3487348
|
PTPN1
PTPN1 LD Block Co-Variant
|
Intronic PTPN1 variant in the 100-kb haplotype block; T allele associated wit...
|
Blood Sugar & Diabetes
|
|
Moderate
|
|
rs367643250
|
DYRK1B
R102C
|
Rare gain-of-function variant causing autosomal dominant metabolic syndrome (...
|
Blood Sugar & Diabetes
|
|
Strong
|
|
rs4810424
|
R3HDML
R3HDML rs4810424
|
Intronic variant tagging the HNF4A P2 promoter risk haplotype; C allele carri...
|
Fat Storage & Energy
|
|
Moderate
|
|
rs3787345
|
PTPN1
PTPN1 LD Block Co-Variant
|
Intronic PTPN1 tag SNP within the 100-kb PTP1B insulin-resistance haplotype b...
|
Blood Sugar & Diabetes
|
|
Moderate
|
|
rs4994
|
ADRB3
Trp64Arg
|
Beta-3 adrenergic receptor variant that impairs catecholamine-stimulated lipo...
|
Fat Storage & Energy
|
|
Moderate
|
|
rs316019
|
SLC22A2
Ala270Ser
|
Reduces OCT2 organic cation transporter function in the kidney, lowering metf...
|
Pharmacogenomics
|
|
Moderate
|
|
rs3787348
|
PTPN1
PTPN1 intronic variant
|
Intronic PTPN1 tag SNP within the 100-kb insulin-resistance haplotype block; ...
|
Blood Sugar & Diabetes
|
|
Moderate
|
|
rs391300
|
SRR
SRR rs391300
|
Intronic variant in serine racemase that alters D-serine production in pancre...
|
Blood Sugar & Diabetes
|
|
Moderate
|
|
rs660339
|
UCP2
Ala55Val
|
Missense variant reducing mitochondrial uncoupling efficiency in white adipos...
|
Fat Storage & Energy
|
|
Moderate
|
|
rs397514580
|
GCK
GCK MODY2 E339K
|
Pathogenic glucokinase missense variant causing maturity-onset diabetes of th...
|
Blood Sugar & Diabetes
|
|
Strong
|
|
rs6809631
|
PPARG
|
Intronic PPARG promoter tagSNP associated with modest reduction in type 2 dia...
|
Fat Storage & Energy
|
|
Emerging
|
|
rs4607517
|
GCK
GCK fasting glucose GWAS variant
|
Common intronic variant near glucokinase that raises fasting glucose by impai...
|
Blood Sugar & Diabetes
|
|
Strong
|
|
rs4753426
|
MTNR1B
|
Promoter variant in the melatonin receptor 1B gene that alters MTNR1B express...
|
Hormones & Sleep
|
|
Moderate
|
|
rs4807015
|
PTPRS
PTPRS T2D risk variant
|
Intronic PTPRS variant that tags elevated type 2 diabetes risk in both sexes ...
|
Blood Sugar & Diabetes
|
|
Moderate
|
|
rs6981587
|
ANK1
ANK1 small-ankyrin T2D locus variant
|
Intronic ANK1 variant at the NKX6-3/ANK1 type 2 diabetes locus; the T allele ...
|
Fat Storage & Energy
|
|
Moderate
|
|
rs8192678
|
PPARGC1A
Gly482Ser
|
Master mitochondrial biogenesis regulator — Ser482 variant reduces PGC-1alpha...
|
Longevity & Aging
|
|
Strong
|
|
rs4812829
|
HNF4A
HNF4A Intronic T2D Risk Variant
|
Common intronic variant in HNF4A associated with modestly elevated type 2 dia...
|
Blood Sugar & Diabetes
|
|
Strong
|
|
rs3765467
|
GLP1R
Arg131Gln
|
Missense variant in the GLP-1 receptor that alters drug response to GLP-1 ago...
|
Pharmacogenomics
|
|
Moderate
|
|
rs492594
|
G6PC2
Val219Leu
|
Coding variant in the islet glucose-6-phosphatase that fine-tunes the fasting...
|
Blood Sugar & Diabetes
|
|
Moderate
|
|
rs5015480
|
HHEX
HHEX/IDE locus variant
|
Regulatory variant near HHEX and IDE linked to impaired beta-cell development...
|
Blood Sugar & Diabetes
|
|
Established
|
|
rs767870
|
ADIPOR2
ADIPOR2 intron 6 variant
|
Intronic variant in ADIPOR2 (adiponectin receptor 2) associated with reduced ...
|
Fat Storage & Energy
|
|
Moderate
|
|
rs5030868
|
G6PD
G6PD Mediterranean
|
Severe Class II G6PD deficiency variant (c.563C>T, p.Ser188Phe) causing less ...
|
Blood Sugar & Diabetes
|
|
Established
|
|
rs5210
|
KCNJ11
KCNJ11 Kir6.2 Co-Variant
|
A regulatory 3' UTR variant in KCNJ11 that modulates KATP channel expression ...
|
Blood Sugar & Diabetes
|
|
Moderate
|
|
rs5219
|
KCNJ11
E23K
|
Controls the pancreatic beta-cell potassium channel that regulates insulin se...
|
Blood Sugar & Diabetes
|
|
Strong
|
|
rs9817428
|
PPARG
PPARG promoter tagSNP
|
Intronic PPARG tagSNP with cross-ethnic replication for type 2 diabetes risk ...
|
Fat Storage & Energy
|
|
Emerging
|
|
rs564398
|
CDKN2B-AS1
|
Secondary T2D risk variant at the 9p21 CDKN2A/B locus within ANRIL (CDKN2B-AS...
|
Blood Sugar & Diabetes
|
|
Moderate
|
|
rs587777380
|
DYRK1B
H90P / H90R
|
Multi-allelic pathogenic locus — both H90P (T>G) and H90R (T>C) disrupt the D...
|
Blood Sugar & Diabetes
|
|
Strong
|
|
rs6020611
|
PTPN1
|
Intronic PTPN1 tag SNP in the PTP1B regulatory LD block; the minor A allele i...
|
Blood Sugar & Diabetes
|
|
Moderate
|
|
rs6031551
|
HNF4A
HNF4A Regulatory Variant
|
Intronic variant 80 bp from rs6031552 within the HNF4A P2 promoter haplotype ...
|
Blood Sugar & Diabetes
|
|
Emerging
|
|
rs6031552
|
HNF4A
HNF4A Regulatory Variant
|
Intronic variant tagging the HNF4A P2 promoter haplotype; carriers have modes...
|
Blood Sugar & Diabetes
|
|
Moderate
|
|
rs6067484
|
PTPN1
PTPN1 rs6067484
|
Intronic PTPN1 tag SNP within the 100-kb T2D-risk haplotype block — carriers ...
|
Blood Sugar & Diabetes
|
|
Moderate
|
|
rs653178
|
SH2B3
ATXN2/SH2B3 12q24 pleiotropic locus
|
Pleiotropic 12q24 locus variant in SH2B3 (LNK) modulating JAK-STAT cytokine s...
|
Blood Sugar & Diabetes
|
|
Strong
|
|
rs689
|
INS
INS VNTR (Type 1 Diabetes Susceptibility)
|
Tag SNP for the insulin gene VNTR promoter — shorter Class I repeats raise T1...
|
Blood Sugar & Diabetes
|
|
Strong
|
|
rs7202877
|
CTRB1
|
Intergenic variant near CTRB1/CTRB2 that regulates chymotrypsinogen expressio...
|
Blood Sugar & Diabetes
|
|
Strong
|
|
rs76723693
|
G6PD
G6PD Nefza (c.968T>C)
|
Missense variant in glucose-6-phosphate dehydrogenase causing Class III G6PD ...
|
Blood Sugar & Diabetes
|
|
Strong
|
|
rs780095
|
GCKR
GCKR Glucose-Lipid Regulation Variant
|
Intronic GCKR enhancer variant on the CGG regulatory haplotype; the G allele ...
|
Blood Sugar & Diabetes
|
|
Moderate
|
|
rs780096
|
GCKR
GCKR Metabolic Balance Variant
|
Intronic GCKR enhancer variant that modulates FOXA2-driven GCKR expression in...
|
Blood Sugar & Diabetes
|
|
Moderate
|
|
rs7903146
|
TCF7L2
|
Main type 2 diabetes risk variant - strongly modulated by dietary fat
|
Blood Sugar & Diabetes
|
|
Established
|
|
rs622342
|
SLC22A1
A>C
|
Intronic variant in the OCT1 organic cation transporter reducing hepatic metf...
|
Pharmacogenomics
|
|
Moderate
|
|
rs914458
|
PTPN1
PTPN1 downstream variant
|
Downstream regulatory variant 10 kb 3' of PTPN1 (PTP1B) associated with type ...
|
Blood Sugar & Diabetes
|
|
Emerging
|
|
rs9402571
|
SGK1
|
Regulatory variant in SGK1 (serum/glucocorticoid regulated kinase 1) — the mi...
|
Blood Sugar & Diabetes
|
|
Moderate
|
|
rs941798
|
PTPN1
|
Intronic PTPN1 variant tagging a haplotype block associated with reduced insu...
|
Blood Sugar & Diabetes
|
|
Moderate
|
|
rs6923761
|
GLP1R
Gly168Ser
|
GLP-1 receptor variant that alters response to GLP-1 agonist medications used...
|
Pharmacogenomics
|
|
Moderate
|