rs932764 — PLCE1
Intronic variant in PLCE1 (phospholipase C epsilon 1) associated with elevated systolic and diastolic blood pressure; the G allele has been linked in large GWAS to modestly higher blood pressure and, through shared genetic architecture, to increased susceptibility to preeclampsia and other hypertensive disorders of pregnancy
Details
- Gene
- PLCE1
- Chromosome
- 10
- Risk allele
- G
- Consequence
- Intronic
- Inheritance
- Additive
- Clinical
- Risk Factor
- Evidence
- Strong
- Chip coverage
- v3 v4 v5
Population Frequency
Ancestry Frequencies
Related SNPs
Category
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PLCE1 rs932764 — Blood Pressure, Kidney Signaling, and Preeclampsia Susceptibility
Preeclampsia — the sudden onset of high blood pressure and proteinuria after 20 weeks of pregnancy — is one of the leading causes of maternal and fetal mortality worldwide, affecting 2–8% of pregnancies. Although its origins are multifactorial, genetic predisposition to elevated blood pressure plays a measurable role. A variant in PLCE1 (phospholipase C epsilon 1), rs932764, sits at the intersection of two well-established biological processes: renal control of blood pressure and the endothelial dysfunction that characterises early preeclampsia.
The Mechanism
PLCE1 encodes phospholipase C epsilon 111 phospholipase C epsilon 1
a bifunctional enzyme that hydrolyses
phosphatidylinositol-4,5-bisphosphate to generate the second messengers IP3 and
diacylglycerol (DAG), and also activates Ras/MAPK signaling via its RasGEF
domain. In the kidney, PLCE1 is
expressed in podocytes — the specialised epithelial cells that form the filtration
slits of the glomerular basement membrane. Loss-of-function mutations in PLCE1
cause nephrotic syndrome type 3 (NPHS3), characterised by proteinuria and
progressive renal failure; a hallmark that is biochemically similar to the
proteinuria of severe preeclampsia.
The rs932764 intronic variant does not alter the protein sequence but is thought
to influence PLCE1 expression levels in renal and vascular tissue. The downstream
consequence is subtly altered podocyte integrity and glomerular filtration
barrier function22 podocyte integrity and glomerular filtration
barrier function
the glomerular filtration barrier determines how much protein
leaks into urine; impaired barrier function manifests as proteinuria, a cardinal
sign of preeclampsia, with knock-on
effects on renal sodium handling and vascular tone. IP3/DAG signalling also
activates TRPC6 calcium channels33 TRPC6 calcium channels
transient receptor potential canonical 6
channels; mediators of Ca²⁺ influx in podocytes and vascular smooth muscle cells,
linking PLCE1 activity directly to vascular contractility and blood pressure
regulation.
The Evidence
The foundational evidence for rs932764 comes from a landmark 2011 multi-stage GWAS
of blood pressure by Ehret et al. (ICBP consortium) in Nature44 Ehret et al. (ICBP consortium) in Nature
69,395-person
discovery in 29 European-descent cohorts, followed by validation in 133,661
additional individuals; total ≈ 200,000 individuals.
The G allele at rs932764 was associated with +0.484 mmHg systolic blood pressure
(SBP; P=7.1×10⁻¹⁶) and +0.185 mmHg diastolic blood pressure (DBP; P=8.1×10⁻⁷),
with a hypertension association P=9.4×10⁻⁹. Although each copy of the G allele
adds less than half a millimetre of mercury on average, this effect integrates
across a lifetime of continuous blood pressure exposure and compounds with other
variants.
A 2023 genome-wide association meta-analysis by Tyrmi et al. in JAMA Cardiology55 Tyrmi et al. in JAMA Cardiology
16,743 women with preeclampsia; cohorts from Finland, Estonia, and the InterPregGen
consortium identified the PLCE1 locus
as one of seven novel preeclampsia risk loci that overlap with established blood
pressure loci. The lead signal near PLCE1 (rs10882398) was associated with
preeclampsia/gestational hypertension with OR 1.11 (95% CI 1.08–1.14; P=1.77×10⁻¹³)
— a finding the authors interpreted through PLCE1's role in podocyte function and
the glomerular filtration barrier. The same study noted that several blood pressure
genes show pleiotropic effects on cardiometabolic, endothelial, and placental
function, consistent with the clinical overlap between chronic hypertension and
preeclampsia.
A regional Russian study by Churnosov et al. (Placenta, 2022)66 Churnosov et al. (Placenta, 2022)
452 preeclampsia
patients and 498 controls, Caucasian, Central Russia
found that rs932764 contributed to the highest proportion of epistatic interaction
models (≥50%) among ten hypertension susceptibility SNPs examined in preeclampsia.
Follow-up work from the same group (Ivanova et al. 2023, two papers77 Ivanova et al. 2023, two papers
n=939 HTN cases/466 controls and n=1,405 sex-stratified hypertension analysis)
confirmed rs932764's presence in the top interaction model for hypertension:
a four-locus combination with TBX2, AC026703.1, and RGL3 (Wald stat=33.53; p_perm<0.001).
Practical Actions
For individuals carrying one or two G alleles, the clinically meaningful period is the periconceptional and prenatal window. The G allele appears to contribute to a subtle but persistent upward pressure on basal blood pressure that may be unmasked by the haemodynamic demands of pregnancy. Specific monitoring strategies — particularly early blood pressure surveillance and attention to proteinuria screening — are indicated rather than generic lifestyle modifications. For carriers considering pregnancy, discussing the PLCE1 finding with an obstetrician or maternal-fetal medicine specialist before conception may allow earlier surveillance planning.
Dietary approaches with specific mechanistic relevance to the PLCE1/podocyte
pathway include maintaining adequate dietary nitrate (leafy green vegetables),
which supports endothelial nitric oxide production88 endothelial nitric oxide production
a key vasodilatory
mechanism often impaired in preeclampsia
and limiting sodium intake below 2,300 mg/day, which directly reduces the
renal filtration burden on structurally compromised glomeruli.
Interactions
The strongest documented interaction context for rs932764 involves NPR3 rs2609002. NPR3 encodes the natriuretic peptide clearance receptor, and loss-of-function variants accelerate ANP clearance from circulation. ANP (atrial natriuretic peptide) promotes renal sodium excretion, counteracts the renin-angiotensin system, and participates in uterine spiral artery remodelling — a process impaired in early preeclampsia pathogenesis. Individuals carrying both PLCE1 rs932764 GG/AG (glomerular filtration compromise) and NPR3 rs2609002 risk genotypes (reduced ANP clearance counter-signalling) may face compounding susceptibility to gestational hypertension through dual impairment of renal pressure regulation — via the structural podocyte axis (PLCE1) and the natriuretic signalling axis (NPR3). Carriers of both risk variants should be considered for early antenatal blood pressure surveillance and pre-conception counselling.
Genotype Interpretations
What each possible genotype means for this variant:
Standard blood pressure genetics at PLCE1
The PLCE1 rs932764 locus influences blood pressure via its role in kidney podocyte function and glomerular filtration signalling. The AA genotype does not carry the G allele effect (+0.484 mmHg SBP per allele in European populations, P=7.1×10⁻¹⁶) documented in the landmark Ehret et al. 2011 GWAS. Population-level preeclampsia risk attributable to this specific SNP is therefore not elevated.
Mildly elevated blood pressure signal at PLCE1
The G allele at rs932764 is thought to subtly alter PLCE1 expression in kidney podocytes — the cells that maintain the glomerular filtration barrier. Even a modest structural compromise in this barrier can affect renal sodium handling, contributing to higher ambient blood pressure. During pregnancy, when cardiac output increases by 30–50% and the kidneys are under heightened demand, a pre-existing functional variation at this locus may contribute to blood pressure instability. Tyrmi et al. (2023, JAMA Cardiology) identified the PLCE1 locus among seven novel preeclampsia-associated loci that overlap blood pressure genetics, with OR 1.11 per risk allele for gestational hypertension/preeclampsia. Churnosov et al. (2022) showed that rs932764 contributed to more than 50% of the most significant gene-gene interaction models for preeclampsia in a Caucasian population study.
Elevated blood pressure signal at PLCE1 — heightened preeclampsia vigilance warranted
The PLCE1 protein is critical for maintaining the structural and functional integrity of renal podocytes — the cells whose interdigitating foot processes form the filtration slits that prevent protein from spilling into urine. In the GG genotype, the cumulative effect of two G alleles on PLCE1 expression is expected to produce the most pronounced reduction in podocyte signalling competency at this locus. The resulting subtle reduction in glomerular filtration barrier fidelity translates into a slight upward pressure on blood pressure through impaired renal pressure regulation.
In pregnancy, the kidneys are already under substantially increased haemodynamic demand. When PLCE1-related podocyte function is additionally compromised, the threshold for developing preeclamptic proteinuria and blood pressure instability may be reached earlier and at lower cumulative stress levels. The interaction data from Churnosov et al. (2022) and Ivanova et al. (2023) specifically implicated rs932764 as the single most epistatically interactive variant in their preeclampsia models, appearing in over half of all significant gene-gene interaction patterns tested.
Carriers of GG should discuss this finding with their obstetric care team before conception or at the earliest opportunity in pregnancy. Low-dose aspirin (75–150 mg/day, initiated before 16 weeks of gestation) has Level I evidence for reducing preeclampsia risk in those assessed as high risk by standard clinical criteria — and genetic findings such as this one may contribute to that risk stratification conversation.
Key References
Ehret et al. 2011 Nature (n≈200,000 Europeans, multi-stage GWAS): rs932764 G allele associated with +0.484 mmHg SBP (P=7.1×10⁻¹⁶) and +0.185 mmHg DBP (P=8.1×10⁻⁷); hypertension OR P=9.4×10⁻⁹; PLCE1 identified as novel blood pressure locus via podocyte/glomerular filtration mechanism
Tyrmi et al. 2023 JAMA Cardiology (16,743 preeclampsia cases): PLCE1 locus identified as one of seven novel blood-pressure-associated loci conferring preeclampsia risk; nearby variant rs10882398 OR 1.11 (95% CI 1.08–1.14, P=1.77×10⁻¹³) for preeclampsia/gestational hypertension
Churnosov et al. 2022 Placenta (452 PE cases/498 controls, Central Russian Caucasians): rs932764 PLCE1 contributed to the largest proportion of epistatic models (≥50%) among 10 hypertension SNPs examined for preeclampsia susceptibility
Ivanova et al. 2023 Int J Mol Sci (1,405 European Russians, sex-specific analysis): rs932764 included among ten GWAS-noticeable polymorphisms associated with hypertension; examined for sex-specific interaction patterns
Ivanova et al. 2023 Int J Mol Sci (939 HTN cases/466 controls, Central Russia): rs932764 PLCE1 was among seven SNPs linked to hypertension through SNP-SNP interaction models; the four-locus model including PLCE1 rs932764 × TBX2 × AC026703.1 × RGL3 was the top interaction model (Wald stat=33.53, p_perm<0.001)