Research

rs28937900 — FKRP L276I

The most common pathogenic mutation in FKRP causing limb-girdle muscular dystrophy R9 (LGMD R9) in European populations; homozygous carriers develop progressive proximal muscle weakness

Established Pathogenic Share

Details

Gene
FKRP
Chromosome
19
Risk allele
A
Clinical
Pathogenic
Evidence
Established

Population Frequency

AA
0%
AC
0%
CC
100%

Category

Fitness & Body

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FKRP L276I — The Most Common European Muscular Dystrophy Mutation

The FKRP gene encodes fukutin-related protein11 fukutin-related protein
A Golgi-resident enzyme that adds sugar molecules to alpha-dystroglycan, a key protein linking muscle fibers to the surrounding extracellular matrix
, a glycosyltransferase enzyme that modifies the surface of muscle fiber membranes. The c.826C>A mutation (L276I) substitutes leucine with isoleucine at amino acid position 276, partially disrupting this enzyme's function. In the autosomal recessive inheritance pattern, two copies of the risk allele are needed to cause disease — but single-copy carriers are clinically important for reproductive counseling.

This variant is a European founder mutation: the same ancestral chromosomal haplotype has been identified in patients of European descent across the UK, Germany, Scandinavia, North America, and Brazil, suggesting a single common ancestor. It is essentially absent from East Asian and South Asian populations. In Northern European cohorts such as Norway, the population prevalence of LGMD R922 population prevalence of LGMD R9
Limb-girdle muscular dystrophy R9, previously called LGMD2I — R9 refers to the FKRP gene in the revised 2017 nomenclature
reaches 2.84 per 100,000, the highest reported worldwide.

The Mechanism

FKRP normally catalyses the transfer of ribitol-5-phosphate onto the O-mannosyl glycan chain33 O-mannosyl glycan chain
A chain of sugar molecules attached to serine or threonine residues on alpha-dystroglycan via oxygen linkage
of alpha-dystroglycan (α-DG). This glycan chain is the molecular "glue" that lets muscle fibers attach to laminin and other proteins in the extracellular matrix. Without proper glycosylation, the muscle membrane is structurally fragile and tears during repeated contraction cycles, triggering progressive degeneration and fibrosis.

The L276I mutation reduces but does not abolish FKRP enzyme activity. This partial loss explains why homozygous carriers typically develop a milder, later-onset muscular dystrophy compared to patients with FKRP null alleles (frameshift or nonsense mutations), who can present with severe Walker-Warburg syndrome in infancy. In the mouse model44 mouse model
Krag TO & Vissing J. A New Mouse Model of Limb-Girdle Muscular Dystrophy Type 2I Homozygous for the Common L276I Mutation. J Neuropathol Exp Neurol, 2015
, homozygous L276I mice show a 78% reduction in α-DG glycosylation by 20 months, accompanied by progressive fibrosis and myopathy — faithfully mirroring the human disease.

The Evidence

The Global FKRP Registry55 Global FKRP Registry
Murphy LB et al. Global FKRP Registry: Observations in More Than 300 Patients with Limb Girdle Muscular Dystrophy R9. Ann Clin Transl Neurol, 2020
analysed 305 genetically confirmed LGMD R9 patients: 67.9% were homozygous for c.826C>A, 28.5% compound heterozygous. Among the cohort, 75.1% remained ambulant at time of enrollment, and 23.2% had documented cardiac impairment.

A Norwegian national cohort study66 Norwegian national cohort study
Jensen SM et al. Epidemiology and Natural History in 101 Subjects with FKRP-Related Limb-Girdle Muscular Dystrophy R9. Neuromuscular Disorders, 2023
of 101 patients found that 88% were homozygous for c.826C>A. Disease showed a bimodal age-of-onset distribution, and one-third of patients developed respiratory insufficiency before losing ambulation. Cardiomyopathy correlated with male sex but not with age or functional stage.

A dedicated cardiomyopathy study77 cardiomyopathy study
Libell EM et al. Cardiomyopathy in Limb Girdle Muscular Dystrophy R9, FKRP Related. Muscle Nerve, 2020
of 56 LGMD R9 patients found cardiomyopathy in 45% overall. Among those homozygous for c.826C>A, the median age at cardiomyopathy onset was 54.2 years — substantially later than patients carrying other, more severe FKRP mutations (median 18.1 years). This genotype-specific timeline is clinically meaningful for structuring cardiac surveillance programs.

Practical Actions

Homozygous AA carriers require regular cardiac screening (echocardiogram and ECG at diagnosis, then every 2–3 years), pulmonary function monitoring, and referral to a neuromuscular specialist for management of progressive proximal muscle weakness. Physical therapy focused on maintaining ambulation and respiratory muscle strength should begin proactively. Gene therapy trials are actively ongoing — enrolling in a clinical trial registry88 clinical trial registry
ClinicalTrials.gov FKRP gene therapy trials
is appropriate.

Heterozygous CA carriers do not develop disease themselves but carry a 50% per-pregnancy chance of passing the risk allele. When both reproductive partners are carriers, each pregnancy has a 25% chance of producing an affected (AA) child. Preconception genetic counseling and, if desired, preimplantation genetic testing (PGT-M) are clinically appropriate options.

Interactions

No compound heterozygosity interactions are captured here for L276I specifically, since the disease mechanism requires homozygosity or trans-compound heterozygosity with a second FKRP pathogenic allele. Other FKRP variants that can compound with L276I in trans to cause LGMD R9 include deletion/frameshift mutations in FKRP that individually cause more severe phenotypes (Walker-Warburg syndrome). Compound heterozygotes with one c.826C>A allele and one severe allele typically present with an intermediate phenotype, more severe than homozygous L276I but milder than homozygous null alleles.

Genotype Interpretations

What each possible genotype means for this variant:

CC “Non-Carrier” Normal

No FKRP L276I variant — standard muscle fiber membrane function

You carry two copies of the reference C allele at rs28937900. Your FKRP gene does not carry the L276I mutation at this position, meaning your fukutin-related protein produces normal glycosylation of alpha-dystroglycan in muscle fibers.

This is the common genotype worldwide. About 99.6% of people of European descent share this result.

AC “Carrier” Carrier Caution

Carrier for FKRP L276I — one copy of the muscular dystrophy mutation

The FKRP L276I mutation follows strict autosomal recessive inheritance. Extensive clinical registry data covering 300+ patients confirm that heterozygous carriers do not develop LGMD R9; the disease requires biallelic loss of FKRP function. Your single non-functional copy is compensated by the other working copy.

The reproductive implications are real and worth discussing with a genetic counselor if family planning is relevant, particularly if there is any family history of muscular dystrophy or if you are in a relationship with another person of Northern European descent (where carrier frequency is highest).

AA “Homozygous” Homozygous Critical

Homozygous for FKRP L276I — high risk for limb-girdle muscular dystrophy R9

Among 305 genetically confirmed LGMD R9 patients in the Global FKRP Registry, 67.9% were homozygous for c.826C>A. The natural history shows progressive but often slow disease: 75.1% of registry patients remained ambulant. Age at loss of ability to run, use of ankle-foot orthoses, and wheelchair dependency vary considerably between individuals.

Cardiac involvement is a major source of morbidity and mortality in LGMD R9. A dedicated study found cardiomyopathy in 45% of 56 patients, with homozygous L276I carriers showing median cardiomyopathy onset at 54.2 years. This mandates structured, longitudinal cardiac surveillance even in patients who feel cardiac-symptom-free.

Respiratory involvement affects approximately one-third of Norwegian LGMD R9 patients, sometimes preceding wheelchair dependency and frequently manifesting first as nocturnal hypoventilation or sleep apnea. Annual spirometry is recommended once patients are established in care.

Preclinical and early clinical gene therapy trials using AAV vectors to deliver functional FKRP have shown restoration of α-dystroglycan glycosylation and cardiac function in mouse models. Human trials are in progress.