Research

rs1801394 — MTRR A66G

B12 recycling enzyme — regenerates active B12 for the methylation cycle

Moderate Benign

Details

Gene
MTRR
Chromosome
5
Risk allele
G
Protein change
p.Ile22Met
Consequence
Missense
Inheritance
Codominant
Clinical
Benign
Evidence
Moderate
Chip coverage
v3 v4 v5

Population Frequency

AA
25%
AG
50%
GG
25%

Ancestry Frequencies

european
56%
south_asian
53%
latino
37%
east_asian
28%
african
28%

MTRR — The B12 Recycling Enzyme

Methionine synthase reductase (MTRR) is a critical support enzyme in the methylation cycle. Its job is to reactivate methionine synthase (MTR) after it becomes oxidized and inactive during normal operation. Think of MTRR as the maintenance crew that keeps the methylation assembly line running.

The Mechanism

MTR uses methylcobalamin 11 Methylcobalamin: the methyl-carrying form of vitamin B12, one of two bioactive cobalamin forms (active B12) as a cofactor to convert homocysteine to methionine. During this reaction, B12 occasionally becomes oxidized to an inactive form. MTRR steps in to reduce (reactivate) the B12, restoring MTR function. The A66G variant (rs1801394) causes an isoleucine-to-methionine substitution 22 Isoleucine-to-methionine substitution at position 22 of the protein (p.Ile22Met) at position 22, which reduces MTRR's ability to perform this reactivation efficiently. ClinVar classifies this as benign given its very high population frequency, though functional studies show reduced enzyme affinity for MTR.

The Evidence

The GG genotype has been associated with elevated homocysteine33 associated with elevated homocysteine
Gueant-Rodriguez RM et al. MTRR and neural tube defect risk, 2003
levels in several studies, though the effect is typically smaller than that of MTHFR C677T. A meta-analysis44 meta-analysis
Botto LD & Yang Q. Meta-analysis of one-carbon metabolism variants and NTD risk, 2006
found that the G allele modestly increases the risk of neural tube defects and is associated with altered DNA methylation patterns. The variant is extremely common — about 50% of Europeans are heterozygous (AG) and 25% are homozygous (GG).

B12 Form Matters

Because MTRR affects B12 reactivation, the form of B12 you consume may matter. Hydroxocobalamin is the preferred form because it can be readily converted to both methylcobalamin (for methylation) and adenosylcobalamin 55 Adenosylcobalamin is the mitochondrial form of B12, essential for energy metabolism via the citric acid cycle (for energy metabolism). Cyanocobalamin (the cheapest supplement form) requires additional conversion steps and may be less efficient if your MTRR is compromised.

Practical Implications

If you carry the G allele, ensuring adequate B12 intake becomes more important than average. This is especially relevant for vegetarians and vegans who may already be at risk for B12 deficiency. Active B12 forms (hydroxocobalamin, methylcobalamin, adenosylcobalamin) may be preferable to cyanocobalamin.

Interactions

MTRR works in concert with MTR (rs1805087) — both variants affect B12 handling in the methylation cycle. Combined with MTHFR variants (rs1801133), impairment at multiple points compounds the effect on overall methylation capacity.

Nutrient Interactions

vitamin B12 increased_need
vitamin B12 increased_need

Genotype Interpretations

What each possible genotype means for this variant:

AA “Normal Recycling” Normal

Normal B12 recycling

Your MTRR enzyme efficiently recycles oxidized B12 back to its active form, keeping your B12-dependent methylation running smoothly. About 25% of Europeans share this genotype.

AG “Mildly Reduced Recycling” Intermediate

Mildly reduced B12 recycling

You carry one variant allele, which somewhat reduces B12 recycling efficiency. Combined with other methylation variants, this may increase your B12 needs. About 50% of people share this genotype.

GG “Reduced Recycling” Reduced Caution

Reduced B12 recycling — may need more B12

You have two copies of this variant. Your B12 recycling is less efficient, which may increase your B12 requirements. About 25% of Europeans share this genotype.

Key References

PMID: 12325232

MTRR A66G variant associated with elevated homocysteine and neural tube defect risk

PMID: 17024475

Meta-analysis of one-carbon metabolism gene variants and neural tube defect risk

PMID: 24261678

Meta-analysis of MTRR A66G polymorphism and leukemia risk

PMID: 15979034

Population study of folate cycle gene variants and homocysteine levels