rs1138272 — GSTP1 Ala114Val
Second functional variant in glutathione S-transferase Pi 1, reducing enzyme activity to ~80% of normal and defining key GSTP1 haplotypes that affect detoxification capacity and cancer susceptibility
Details
- Gene
- GSTP1
- Chromosome
- 11
- Risk allele
- T
- Protein change
- p.Ala114Val
- Consequence
- Missense
- Inheritance
- Codominant
- Clinical
- Risk Factor
- Evidence
- Moderate
- Chip coverage
- v3 v4 v5
Population Frequency
Ancestry Frequencies
Related SNPs
Category
Methylation & DetoxGSTP1 Ala114Val -- The Second Hit in Glutathione Detoxification
Glutathione S-transferase Pi 1 (GSTP1) is one of the most abundant
Phase II detoxification enzymes11 Phase II detoxification enzymes
Phase II enzymes conjugate activated toxins with molecules like glutathione, making them water-soluble for excretion via urine or bile
in the human body, expressed at particularly high levels in the lungs, skin,
oesophagus, and placenta. The enzyme catalyzes the conjugation of
reduced glutathione (GSH)22 reduced glutathione (GSH)
A tripeptide (glutamate-cysteine-glycine) that serves as the body's master antioxidant and detoxification cofactor
to a wide range of electrophilic compounds -- from environmental pollutants
like polycyclic aromatic hydrocarbons and heavy metals to chemotherapy
drugs like cisplatin and carboplatin.
The rs1138272 variant causes an alanine-to-valine substitution at position
114 (Ala114Val, also designated c.341C>T) in exon 6 of the GSTP1 gene on
chromosome 11q13.2. This is the second of two well-characterized functional
polymorphisms in GSTP1, the first being
Ile105Val (rs1695)33 Ile105Val (rs1695)
The more common GSTP1 variant, which has a stronger individual effect on enzyme activity and substrate specificity.
Together, these two SNPs define the classical GSTP1 haplotype system:
*A (Ile105/Ala114, wild-type), *B (Val105/Ala114), *C (Val105/Val114,
lowest activity), and *D (Ile105/Val114).
The Mechanism
The Ala114Val substitution sits near the
H-site44 H-site
The hydrophobic substrate-binding pocket of GST enzymes, which determines what electrophilic compounds the enzyme can process
of the GSTP1 enzyme. A comprehensive
functional genomics study55 functional genomics study
Moyer AM et al. Glutathione S-transferase P1: gene sequence variation and functional genomic studies. Cancer Res, 2008
expressed all known GSTP1 variant allozymes in COS-1 cells and measured
their catalytic activity. The Val114 variant retained approximately 80% of
wild-type enzyme activity (79.9 +/- 5.1%, p<0.05). By comparison, the
Val105 variant dropped to just 21.8% of wild-type activity. The double
variant (Val105/Val114, the *C haplotype) showed 74.1% activity --
suggesting that in the context of an already impaired Val105 enzyme,
the Val114 change partially compensates through altered protein folding.
The protein-level explanation involves both reduced
immunoreactive protein66 immunoreactive protein
The amount of GSTP1 protein detectable by antibodies, which reflects both synthesis rate and protein stability
and altered substrate kinetics. The wild-type enzyme (Ile105/Ala114) has
a Km of 0.33 mM for the standard substrate
CDNB77 CDNB
1-chloro-2,4-dinitrobenzene, the standard laboratory substrate used to measure GST enzyme activity,
indicating high affinity. Variants at position 105 raise the Km to 1.15 mM,
reflecting reduced substrate binding. Position 114 modulates thermal
stability and the geometry of the substrate-binding pocket without
dramatically altering Km on its own, but it contributes meaningfully
when both variants are present.
The Evidence
Cancer susceptibility. A
meta-analysis of 43 case-control studies88 meta-analysis of 43 case-control studies
Kuang M et al. Comprehensive analysis of the association between the rs1138272 polymorphism of the GSTP1 gene and cancer susceptibility. Front Physiol, 2019
totalling 15,688 cancer cases and 17,143 controls found that the TT
genotype increases overall cancer risk (OR 1.45, P = 0.002) under a
recessive model. The effect was strongest in Asian populations (TT vs CC:
OR 6.51) and African populations (T allele: OR 3.66), where the variant
is rare and carriers may face higher relative risk. Among Caucasians, the
association was significant for specific cancer sites: head and neck cancer
(TT: OR 3.11) and lung cancer (dominant model: OR 1.22).
A
South African study of oesophageal cancer99 South African study of oesophageal cancer
Li D et al. The 341C/T polymorphism in the GSTP1 gene is associated with increased risk of oesophageal cancer. BMC Genetics, 2010
found the CT genotype carried an OR of 4.98 and the TT genotype an OR of
10.9 compared to wild-type, with risk amplified dramatically by tobacco
smoking (OR 7.51) and alcohol consumption (OR 15.3) -- environmental
exposures that generate the very electrophilic compounds GSTP1 detoxifies.
Haplotype effects. A
Serbian prostate cancer study1010 Serbian prostate cancer study
Savic-Radojevic A et al. GSTP1 rs1138272 polymorphism affects prostate cancer risk. Medicina, 2020
found that carriers of the GSTP1*C haplotype (Val105 + Val114, combining
both rs1695 and rs1138272 variants) had a 5.46-fold higher risk of
prostate cancer compared to those with the *A haplotype. The cumulative
effect of multiple GST risk alleles (including GSTM1 and GSTT1 deletions)
reached a 12-fold risk increase in individuals carrying all four risk
variants.
Enzyme biochemistry. A
study of all four GSTP1 allozymes1111 study of all four GSTP1 allozymes
Pal A et al. Variants of glutathione S-transferase Pi 1 exhibit differential enzymatic activity and inhibition by heavy metals. PLoS One, 2012
confirmed that allozymes with Ile105 had superior catalytic efficiency and
greater substrate affinity. Heavy metal sensitivity varied by genotype --
the Val105/Ala114 variant was most sensitive to mercury, while
Ile105/Val114 was least sensitive, suggesting that the Ala114Val change
may paradoxically improve tolerance to certain environmental metals.
Practical Implications
The Ala114Val variant alone reduces GSTP1 activity modestly (~20% reduction). The practical significance scales with environmental exposure: individuals with reduced GSTP1 activity who are also exposed to tobacco smoke, heavy metals, pesticides, or occupational chemicals face a disproportionately higher risk because their conjugation capacity is already diminished. Supporting glutathione status through N-acetylcysteine (the most effective oral glutathione precursor), cruciferous vegetables rich in sulforaphane (which upregulates Phase II enzymes including GSTP1), and reducing unnecessary toxicant exposure are the primary actionable strategies.
For individuals undergoing platinum-based chemotherapy (cisplatin, carboplatin), GSTP1 genotype may influence both drug efficacy and toxicity, since GSTP1 directly conjugates platinum compounds. Reduced GSTP1 activity may increase platinum sensitivity but also increase toxicity risk -- a double-edged sword that oncologists should be aware of.
Interactions
The most important interaction is with rs1695 (GSTP1 Ile105Val). The *C haplotype (Val105 + Val114) represents the lowest-activity form of the enzyme, with substantially greater cancer risk than either variant alone. A compound implication covering the combined GSTP1*C haplotype (rs1695 AG or GG + rs1138272 CT or TT) would be clinically meaningful, as the combined recommendation (aggressive glutathione support, minimizing environmental exposures, oncology awareness) goes beyond what either variant alone warrants.
Beyond GSTP1 itself, other glutathione transferase genes (GSTM1, GSTT1) that can be fully deleted (null genotypes) compound the effect. Individuals with GSTP1 variants plus GSTM1-null and/or GSTT1-null genotypes have cumulative reductions in Phase II detoxification capacity. However, GSTM1 and GSTT1 are copy number variants not typically assessed by 23andMe SNP arrays, so this interaction is noted for awareness rather than actionable in this context.
Nutrient Interactions
Genotype Interpretations
What each possible genotype means for this variant:
Normal GSTP1 Ala114 -- full enzyme activity at this position
You carry the wild-type alanine at position 114 of GSTP1 on both copies. Your enzyme retains full activity from this position, meaning normal glutathione conjugation capacity for detoxifying electrophilic compounds. About 85% of people globally share this genotype, though the frequency varies by ancestry (it is nearly universal in East Asian populations and very common in African populations).
One copy of Val114 -- modestly reduced GSTP1 enzyme activity
The heterozygous CT genotype means one of your two GSTP1 gene copies produces the Val114 variant protein. Functional studies show this variant retains about 80% of wild-type catalytic activity, with subtle changes in the hydrophobic substrate-binding pocket geometry. The meta-analysis of 43 studies found no statistically significant increase in overall cancer risk for heterozygous carriers alone (CT vs CC: OR 1.09, P = 0.106), suggesting the modest activity reduction from one copy is generally well-compensated. However, environmental exposures like tobacco smoke and heavy metals can tip the balance, as shown in the South African oesophageal cancer study where gene-environment interactions dramatically amplified risk.
Two copies of Val114 -- reduced GSTP1 enzyme activity and increased cancer susceptibility
Homozygosity for Val114 means both copies of your GSTP1 gene produce the variant enzyme. The Moyer et al. functional genomics study measured approximately 80% of wild-type activity for the heterozygous state, and the double-variant *C haplotype (Val105/Val114) showed 74.1% activity. For Val114 alone without the Val105 change (the *D haplotype), the activity reduction is proportional.
The clinical evidence for TT homozygotes is notable. The comprehensive meta-analysis found OR 1.45 (P=0.002) for overall cancer risk under a recessive model. In specific populations and cancer types, the effects were larger: OR 6.51 in Asian populations, OR 3.11 for head and neck cancer in Caucasians. The South African study found an OR of 10.9 for oesophageal cancer, rising dramatically with tobacco (OR 7.51) and alcohol (OR 15.3) exposure in combined genotype carriers.
The reduced GSTP1 activity means slower clearance of reactive electrophilic intermediates, allowing them more time to form DNA adducts that can initiate carcinogenesis. This is particularly relevant in tissues where GSTP1 is the dominant GST isoform (lungs, oesophagus, skin).
Key References
Moyer et al. 2008 — functional genomics of GSTP1 across four ethnic groups; Val114 allozyme retains 79.9% of wild-type enzyme activity (p<0.05), with significant correlation between protein level and activity (r=0.79)
Kuang et al. 2019 — meta-analysis of 43 studies (15,688 cases, 17,143 controls); TT genotype increases overall cancer risk (OR 1.45, P=0.002), especially in Asian and African populations
Savic-Radojevic et al. 2020 — Serbian case-control study (237 cases, 236 controls); CT carriers had OR 4.71 for prostate cancer, GSTP1*C haplotype (Val105+Val114) conferred 5.46-fold risk
Li et al. 2010 — South African case-control study; GSTP1 341C/T and T/T genotypes associated with oesophageal cancer risk (OR 4.98 and 10.9), amplified by tobacco and alcohol exposure
Pal et al. 2012 — four GSTP1 allozymes showed differential enzyme activity and heavy metal inhibition; Ile105 variants had better catalytic efficiency (Km 0.33 vs 1.15 mM for CDNB)
Johansson et al. 1998 — structure-activity relationships; position 105 governs thermal stability and H-site substrate accommodation, with Val105 showing 2-3x reduced half-life at 50C