Research

rs17602729 — AMPD1 C34T (Q12X)

Enzyme critical for energy production during high-intensity exercise; deficiency reduces sprint and power performance

Strong Risk Factor

Details

Gene
AMPD1
Chromosome
1
Risk allele
A
Protein change
p.Gln12Ter
Consequence
Nonsense
Inheritance
Codominant
Clinical
Risk Factor
Evidence
Strong
Chip coverage
v3 v4 v5

Population Frequency

GG
74%
AG
24%
AA
2%

Ancestry Frequencies

european
12%
latino
8%
south_asian
2%
african
1%
east_asian
0%

Category

Fitness & Body

The Energy Gatekeeper — AMPD1 and Athletic Performance

Every explosive movement — a sprint, a jump, a tackle — demands instant ATP. When muscles work at maximum intensity, adenosine monophosphate deaminase 1 (AMPD1)11 adenosine monophosphate deaminase 1 (AMPD1)
the muscle-specific isoform of AMP deaminase
orchestrates a critical step in energy recycling: converting AMP to IMP (inosine monophosphate), which feeds back into ATP regeneration through the purine nucleotide cycle. The C34T variant (rs17602729) introduces a premature stop codon at position 12, producing a truncated, nonfunctional enzyme in 1-2% of Caucasians22 1-2% of Caucasians
homozygous for the T allele
.

The consequences are dramatic for athletic performance. A 2025 meta-analysis33 2025 meta-analysis
Kartibou et al. systematic review of 5717 participants across 20 studies
confirmed that possessing two copies of the C allele (wild-type) is associated with 1.72-2.17 times greater odds of achieving elite or sub-elite status in both endurance and power sports. Among Lithuanian elite athletes44 Lithuanian elite athletes
Ginevičienė et al. 2014
, 86.3% of sprint/power athletes carried the CC genotype, compared to just 72.9% of endurance athletes and 74.2% of controls — and the TT genotype was entirely absent in the elite cohort.

This isn't just a statistical association. The enzyme deficiency has clear metabolic effects: 10% lower mean power55 10% lower mean power
Fischer et al. 2007, Wingate cycling test
in AMPD-deficient subjects, faster power decline during repeated sprints, and impaired ATP catabolism during maximal exercise. These findings are directly relevant to football performance, where repeated sprint ability, explosive acceleration, and sustained high-intensity effort separate elite from average players.

Remarkably, the T allele has Neanderthal origins66 the T allele has Neanderthal origins
Nature Communications 2025
, introduced to modern humans through ancient interbreeding. Neanderthals carried a different AMPD1 variant with ~25% lower catalytic activity, and the C34T mutation represents an even more severe loss of function. While complete deficiency is well tolerated in everyday life, it becomes limiting at the extremes of human performance.

The Mechanism

AMPD1 catalyzes the deamination of AMP to IMP, releasing ammonia. This reaction serves multiple critical functions during high-intensity exercise:

  1. ATP regeneration: By removing AMP, AMPD1 drives the adenylate kinase reaction (2 ADP ⇌ ATP + AMP) toward ATP formation, providing additional energy during peak demand.

  2. Maintaining ATP/ADP ratio: Rapid AMP removal prevents ADP accumulation, which is crucial because a high ATP-to-ADP ratio is advantageous for sustained muscle work77 advantageous for sustained muscle work
    Norman et al. 2001
    .

  3. Purine nucleotide cycle flux: IMP feeds back through the purine nucleotide cycle (IMP → AMP → ATP), supporting repeated bursts of maximal effort.

The C34T mutation (c.34C>T) changes codon 34 from CAG (glutamine) to TAG (stop), truncating the protein at position 12 — far too early to form a functional enzyme. Homozygotes (AA genotype)88 Homozygotes (AA genotype)
on the plus strand, equivalent to TT on minus strand
retain only 16% of normal AMPD activity, while heterozygotes (GA) show intermediate activity.

Metabolically, deficient individuals accumulate adenosine instead of IMP during exercise — a 25-fold increase in homozygotes99 25-fold increase in homozygotes
Norman et al. 2001
versus normal. Adenosine is a vasodilator and fatigue signal, potentially contributing to early fatigue and perceived exertion. Meanwhile, reduced IMP accumulation means less substrate available for ATP regeneration during recovery between sprints.

The Evidence

Elite athlete studies: The 2025 meta-analysis by Kartibou et al.1010 2025 meta-analysis by Kartibou et al.
PMID 40332645
examined 1229 studies and included 20 eligible investigations across 11 countries. Results were unequivocal:

  • Endurance athletes: CC genotype OR 1.72 (95% CI 1.40-2.12, p<0.00001); CT genotype OR 0.61 (0.49-0.75); TT genotype OR 0.43 (0.19-0.97, p=0.04) compared to non-athletes.
  • Power athletes: CC genotype OR 2.17 (95% CI 1.69-2.78, p<0.00001); CT genotype OR 0.51 (0.39-0.65); TT genotype OR 0.25 (0.09-0.68, p=0.007) compared to controls.

No significant difference existed between endurance and power athletes — the C allele confers an advantage across metabolic pathways.

Sprint performance testing: Fischer et al. 20071111 Fischer et al. 2007
PMID 17463303
conducted 30-second Wingate cycling tests on 18 subjects stratified by AMPD1 genotype. Peak power was similar across groups, but mean power differed significantly (p=0.0035), with AMPD-deficient subjects averaging 10% lower output. Power decline at 15 seconds was markedly faster in the deficient group (p=0.0006) — a critical finding for football, where players perform 150-250 brief sprints per match with incomplete recovery.

Metabolic profiling: Norman et al. 20011212 Norman et al. 2001
PMID 11408438
performed muscle biopsies before and after Wingate testing. Normal homozygotes showed the highest AMP deaminase activity, net ATP catabolism, and IMP accumulation. Mutant homozygotes had very low enzyme activity, no significant ATP catabolism, no IMP accumulation, and a dramatic 25-fold increase in muscle adenosine. Heterozygotes displayed intermediate metabolic phenotypes but paradoxically showed greater plasma ammonia despite lower IMP production — suggesting compensatory mechanisms.

Population genetics: The T allele reaches 9-14% frequency in Europeans, 8% in Americans, but is virtually absent in East Asians1313 virtually absent in East Asians
1000 Genomes data
and rare in Africans (1%). Among present-day Europeans, approximately 1.8% are homozygous deficient (AA genotype), with 10% heterozygous (GA). Despite the performance penalty at elite levels, the variant is well tolerated in everyday life and persists at high frequency — possibly because explosive athletic performance was not strongly selected for in post-agricultural populations, or because the variant offers unknown advantages in other contexts.

Practical Actions

For individuals with the AA genotype (homozygous deficient), the enzyme deficiency is permanent and cannot be reversed. However, strategies exist to partially compensate for impaired ATP regeneration during high-intensity exercise. For GA heterozygotes, effects are milder but similar principles apply.

D-ribose supplementation: Ribose is a 5-carbon sugar that directly feeds into ATP synthesis, bypassing the purine nucleotide cycle. Case reports1414 Case reports
PMID 3102830
suggest symptomatic relief with oral ribose at ~10 grams per 100 pounds body weight per day (0.2 g/kg), divided into hourly doses around training. However, evidence is mixed1515 evidence is mixed
PMID 1776826
, and ribose does not persist in muscle during heavy exercise, so effects are transient.

Creatine monohydrate: Creatine provides an alternative anaerobic energy buffer (phosphocreatine → creatine + ATP) that operates independently of AMPD1. Standard loading (20 g/day for 5 days, then 5 g/day maintenance) has been suggested for AMPD deficiency1616 suggested for AMPD deficiency
though not specifically tested in RCTs
.

Training adaptations: AMPD-deficient athletes can succeed at elite levels — they simply need to recognize their limits in repeated sprint scenarios. Longer recovery intervals between sprints (60-90 seconds vs 30-45 seconds), gradual volume increases, and strategic substitution patterns in team sports can mitigate the deficit. Over time, the repeated bout effect1717 the repeated bout effect
exercise-induced adaptations
builds tolerance.

Monitoring: Some AA homozygotes experience exercise-induced muscle pain, cramping, or early fatigue beyond what training explains. Creatine kinase (CK) elevation after eccentric exercise may be exaggerated in AMPD deficiency. If symptoms are significant, consultation with a sports medicine physician or metabolic specialist is warranted.

Interactions

ACTN3 R577X (rs1815739): Alpha-actinin-3 is the "speed gene" — the RR genotype is overrepresented in power athletes. AMPD1 CC combined with ACTN3 RR1818 AMPD1 CC combined with ACTN3 RR
Ginevičienė et al. 2014
likely represents an optimal genetic profile for sprint and power sports, though formal interaction studies have not been published. Both genes affect fast-twitch muscle fiber function, but through different mechanisms (structural protein vs energy metabolism).

PPARGC1A Gly482Ser (rs8192678): PGC-1α regulates mitochondrial biogenesis. The Gly/Gly genotype is associated with endurance performance. Combining AMPD1 CC (optimal anaerobic energy) with PPARGC1A Gly/Gly (optimal aerobic capacity) might favor sports requiring both explosive power and endurance (e.g., football, rugby), though no published studies have tested this specific combination.

ACE I/D and AGT M235T (rs699): Both affect vascular function and blood pressure regulation during exercise. Since AMPD1 deficiency impairs ATP regeneration, enhanced oxygen delivery via favorable ACE and AGT genotypes could partially compensate. However, this is speculative — no interaction data exist.

Given the strong association between AMPD1 genotype and elite athlete status across multiple populations and sports, this variant is among the most robust genetic markers for athletic performance identified to date. For talent identification in youth football academies, the CC genotype is a positive indicator, while the AA genotype suggests challenges with repeated sprint ability that may require tailored training approaches.

Nutrient Interactions

D-ribose increased_need
creatine increased_need

Genotype Interpretations

What each possible genotype means for this variant:

GG “Full Activity” Normal

Normal AMPD1 enzyme function

The GG genotype corresponds to normal AMPD1 enzyme expression and activity. During maximal exercise, your muscles generate ATP, use it for contraction, and accumulate AMP as a byproduct. AMPD1 rapidly deaminates AMP to IMP, which serves two critical functions: (1) driving the adenylate kinase reaction toward ATP formation, providing additional energy; (2) feeding IMP back into the purine nucleotide cycle for ATP resynthesis during recovery between sprints.

Meta-analysis of 5717 athletes across 20 studies confirmed that the CC genotype is significantly overrepresented in elite athletes of all types. Among Lithuanian elite athletes, 86.3% of sprint/power specialists carried CC, as did 72.9% of endurance athletes — both higher than the 74.2% population baseline. This suggests that full AMPD1 activity provides a performance advantage whenever repeated bursts of maximal effort are required.

From a mechanistic standpoint, individuals with the GG genotype show the highest levels of IMP accumulation and ATP catabolism during sprint exercise, with efficient ammonia production (a marker of purine nucleotide cycle flux). Muscle adenosine remains low, avoiding the fatigue signals associated with adenosine accumulation in AMPD-deficient individuals.

AG “Intermediate Activity” Intermediate Caution

Reduced AMPD1 enzyme activity (~50%)

The GA genotype produces an intermediate metabolic phenotype. One chromosome expresses normal AMPD1, the other produces a truncated nonfunctional protein due to the premature stop codon at position 12. The result is roughly 50% of normal enzyme activity, though this varies between individuals based on other genetic and environmental factors.

During a 30-second Wingate test, GA heterozygotes show lower IMP accumulation and reduced ATP catabolism compared to GG homozygotes, but not as severe as AA deficient individuals. Interestingly, GA subjects paradoxically show higher plasma ammonia levels despite lower muscle IMP production — suggesting compensatory mechanisms such as increased purine degradation or enhanced amino acid deamination.

Meta-analysis data shows GA heterozygotes are less likely to achieve elite athlete status: OR 0.61 (95% CI 0.49-0.75) for endurance athletes and OR 0.51 (0.39-0.65) for power athletes, both compared to controls. This suggests that even partial AMPD1 deficiency creates a measurable disadvantage at the highest competitive levels, though many GA individuals still compete successfully with appropriate training.

The most noticeable effect is during repeated sprint scenarios with short recovery intervals. While peak power output (the first sprint) is typically normal, mean power across multiple sprints tends to decline faster in GA individuals. This is directly relevant to sports like football, where players perform 150-250 brief maximal efforts per match.

AA “Deficient” Deficient Warning

Severely reduced AMPD1 enzyme activity (~16%)

The AA genotype is caused by homozygosity for the C34T nonsense mutation, which introduces a premature stop codon at position 12 of the AMPD1 protein. Both chromosomes produce truncated peptides that are rapidly degraded, leaving only residual enzyme activity (~16% of normal) from incomplete translation readthrough or alternative isoforms.

The metabolic consequences during high-intensity exercise are profound: (1) no significant IMP accumulation; (2) no measurable ATP catabolism during maximal efforts; (3) no post-exercise increase in plasma ammonia (a marker of purine nucleotide cycle activity); (4) a dramatic 25-fold increase in muscle adenosine compared to normal individuals. Adenosine is a potent vasodilator and also signals fatigue to the central nervous system, contributing to the perception of early exhaustion.

Performance testing reveals clear deficits. During 30-second Wingate cycling tests, AA individuals produce approximately 10% lower mean power and show faster power decline (particularly pronounced after 15 seconds of maximal effort). Peak power (the first few seconds) is often normal because initial ATP stores and phosphocreatine are intact — the deficit emerges as these stores deplete and the purine nucleotide cycle becomes critical.

Elite athlete studies paint a striking picture: in a meta-analysis of power athletes vs controls, the TT genotype (equivalent to AA on plus strand) showed OR 0.25 (95% CI 0.09-0.68, p=0.007). Among Lithuanian elite athletes, the TT genotype was entirely absent (0% prevalence) despite ~2% population frequency. This suggests that AMPD1 deficiency, while benign medically, is a substantial barrier to reaching the highest levels of athletic performance in sports requiring repeated sprints.

Clinically, some AA individuals experience myopathy symptoms: exercise-induced muscle pain, cramping, early fatigue, and occasionally post-exercise rhabdomyolysis with markedly elevated creatine kinase. However, many AA homozygotes are asymptomatic and participate in recreational sports without issue. The key distinction is between recreational participation (possible) and elite-level competition (unlikely).

Key References

PMID: 40332645

Meta-analysis of 5717 participants showing CC genotype associated with 1.72-2.17× greater likelihood of elite athlete status in both endurance and power sports

PMID: 24885427

Lithuanian athlete study demonstrating 86.3% of sprint/power athletes carry CC genotype vs 72.9% endurance athletes and 74.2% controls; TT genotype absent in elite athletes

PMID: 11408438

Metabolic study showing AMPD1 deficiency reduces ATP catabolism and IMP accumulation during sprint exercise, with 25-fold increase in adenosine in homozygotes

PMID: 17463303

Wingate test study demonstrating 10% lower mean power and faster power decline in AMPD-deficient subjects during 30-second maximal sprint