rs1137101 — LEPR Q223R (Gln223Arg)
Common leptin receptor variant affecting satiety signaling and metabolic health
Details
- Gene
- LEPR
- Chromosome
- 1
- Risk allele
- G
- Protein change
- p.Gln223Arg
- Consequence
- Missense
- Inheritance
- Codominant
- Clinical
- Risk Factor
- Evidence
- Moderate
- Chip coverage
- v3 v4 v5
Population Frequency
Ancestry Frequencies
Tags
Category
Nutrition & MetabolismThe Leptin Receptor Paradox — When Satiety Signals Misfire
Your leptin receptor (LEPR) gene codes for the protein that receives signals from
leptin11 leptin
The "satiety hormone" produced by fat cells to signal energy sufficiency,
the hormone your fat cells release to tell your brain you've had enough to eat.
The Q223R variant (rs1137101) is one of the most common and widely studied LEPR
polymorphisms, present in the extracellular domain where leptin binds to its receptor.
This non-conservative amino acid change22 non-conservative amino acid change
Glutamine (neutral) to Arginine (positively charged)
alters the charge and structure of the leptin-binding region, potentially affecting
how efficiently your body responds to satiety signals.
The G allele (encoding Arginine at position 223) has been associated with obesity
susceptibility33 associated with obesity
susceptibility
Meta-analysis of 39 studies shows OR=1.23 for GG vs AA
across multiple populations, though the functional significance remains debated.
Carriers of the G allele tend to have higher circulating leptin levels, which paradoxically
may reflect leptin resistance44 leptin resistance
Elevated leptin fails to suppress appetite effectively
rather than enhanced signaling—a phenomenon central to the biology of obesity.
The Mechanism
The LEPR Q223R polymorphism results from an A-to-G transition (CAG → CGG) at codon 223, located in exon 6 of the leptin receptor gene on chromosome 1p31. This missense variant changes glutamine to arginine in the cytokine receptor homology 1 (CRH1) domain—specifically in the loop connecting the cytokine receptor and fibronectin type III domains where leptin physically binds55 leptin physically binds.
The functional consequences of this variant have been controversial. Early
association studies66 Early
association studies
2001 study found R223 homozygotes had 4.5-5% higher body
fat percentage linked the G allele
to increased BMI and body fat percentage. However, rigorous functional testing
in 200977 rigorous functional testing
in 2009
Stratigopoulos et al. found no effects on weight, body composition,
or STAT3 signaling using mice
with the humanized LEPR allele found no effects on body weight, composition,
energy expenditure, or leptin-induced STAT3 signaling—casting doubt on direct
biological causation.
More recent studies suggest subtle effects on receptor function88 subtle effects on receptor function
21% reduction
in STAT3 activation in some cell culture studies
that may manifest only under specific conditions. The mutant receptor shows
normal leptin binding kinetics but may affect receptor trafficking, surface
expression, or downstream signaling efficiency. GG genotype carriers consistently
show higher circulating leptin levels, which could indicate compensatory
upregulation due to impaired leptin sensitivity99 impaired leptin sensitivity
Your body produces more
leptin trying to overcome reduced receptor responsiveness.
The Evidence
A comprehensive 2024 meta-analysis1010 comprehensive 2024 meta-analysis
39 studies with 6,099 obesity cases and
6,711 controls
analyzed rs1137101 across Asian and Caucasian populations. The findings showed
significant associations across all genetic models: homozygous model (GG vs AA:
OR=1.39, 95% CI=1.12-1.73, p=0.003), dominant model (AG/GG vs AA: OR=1.28,
p=0.001), and allelic model (G vs A: OR=1.19, p=0.002). The association remained
significant in both Asian and Caucasian subgroups, with no evidence of publication bias.
The allele frequency varies dramatically by ancestry1111 allele frequency varies dramatically by ancestry
East Asians: 87% G allele;
Europeans: 45% G allele; Africans: 55% G allele.
This makes the G allele the major allele in East Asian populations but a balanced
polymorphism in other ancestries—one reason why genetic associations may be
stronger in Asian studies.
Beyond obesity, the variant has been linked to type 2 diabetes and metabolic
syndrome1212 type 2 diabetes and metabolic
syndrome
Associated with insulin resistance, dyslipidemia, and elevated fasting
glucose. A
meta-analysis of PCOS studies1313 meta-analysis of PCOS studies
33 studies showing rs1137101 significantly
associated with PCOS susceptibility
found the G allele increased risk of polycystic ovary syndrome, particularly
in Asian populations, with the GG genotype correlating with higher leptin levels
and worse metabolic profiles in PCOS patients.
Practical Actions
While the variant's direct functional impact remains uncertain, population-level
associations suggest GG carriers may benefit from strategies that enhance leptin
sensitivity1414 enhance leptin
sensitivity
Interventions that restore your body's ability to respond to satiety
signals. High-protein
diets appear particularly relevant: studies show protein intake enhances leptin's
satiating effect1515 studies show protein intake enhances leptin's
satiating effect
High-protein diets reduced spontaneous energy intake by 441
kcal/day in the central nervous
system and reduces spontaneous energy intake independent of leptin levels.
Exercise consistently improves leptin sensitivity1616 Exercise consistently improves leptin sensitivity
12+ weeks of moderate-intensity
aerobic or resistance training, 3-4x/week,
particularly moderate-to-high intensity aerobic exercise and resistance training
performed 3-4 times weekly for at least 12 weeks. The mechanism involves
downregulating SOCS3 and PTP1B proteins that inhibit leptin signaling, while
also increasing hypothalamic leptin receptor expression.
Time-restricted eating aligned with circadian rhythms1717 Time-restricted eating aligned with circadian rhythms
Confine eating to an
8-10 hour window during daylight hours
may help restore leptin rhythmicity—leptin normally peaks at night and is lowest
in the morning, and this rhythm is disrupted in obesity. Eating late into the
evening compounds leptin resistance by misaligning feeding with circadian leptin
secretion patterns.
The Mediterranean dietary pattern1818 Mediterranean dietary pattern
Associated with lower leptin levels and
higher adiponectin, rich
in fiber, omega-3 fatty acids, and anti-inflammatory compounds, has been associated
with lower circulating leptin levels and reduced inflammation—both factors that
may improve leptin signaling efficiency in genetically predisposed individuals.
Interactions
The LEPR Q223R variant is one of three common LEPR polymorphisms frequently
studied together: K109R (rs1137100), Q223R (rs1137101), and K656N (rs1805094).
These variants exist in linkage disequilibrium1919 linkage disequilibrium
They're inherited together
more often than expected by chance
(D'=1 but r²<1), meaning they often occur together but aren't perfectly correlated.
Some studies suggest compound effects when multiple variants are present, though
Q223R appears to have the strongest independent association with obesity.
The leptin receptor functions within a broader neuroendocrine signaling network.
Variants in the LEP gene2020 LEP gene
Encodes leptin itself; rs7799039 affects leptin
levels (encoding leptin itself,
particularly rs7799039) may interact with LEPR variants to determine overall
leptin axis function. Additionally, leptin signaling cross-talks with circadian
clock genes2121 cross-talks with circadian
clock genes
CLOCK-BMAL1 regulate PPAR expression which affects leptin production
like CLOCK and BMAL1, creating a bidirectional relationship where leptin influences
circadian rhythms and circadian disruption worsens leptin resistance.
The variant's effects may be most pronounced in the context of obesogenic
environments2222 obesogenic
environments
High-calorie, processed food diets and sedentary behavior amplify
genetic susceptibility—high-calorie
diets, sedentary behavior, and poor sleep. Environmental factors likely obscure
the variant's subtle functional effects in free-living populations, explaining
why controlled functional studies show minimal impact while epidemiological
studies consistently find associations.
Nutrient Interactions
Genotype Interpretations
What each possible genotype means for this variant:
Standard leptin receptor function with typical satiety signaling
You have two copies of the A allele (glutamine at position 223), which is the ancestral form of the leptin receptor. This is the most common genotype in European (31%), Latino (33%), and South Asian (28%) populations. Your leptin receptor has the standard amino acid sequence in the leptin-binding domain, supporting typical satiety signaling and metabolic regulation. Research shows this genotype is associated with lower circulating leptin levels and better leptin sensitivity compared to G allele carriers.
Moderately altered leptin receptor with subtle effects on satiety
The heterozygous state means about half your leptin receptors have the Q223 form and half have R223. While functional studies in controlled settings haven't consistently demonstrated impaired signaling, population studies show AG carriers have intermediate characteristics for BMI, body fat percentage, and circulating leptin levels. The effect size is modest—your genetics explain perhaps 2-3% of variance in body weight and composition. Environmental factors (diet, exercise, sleep) have far greater influence on your metabolic outcomes than this single variant.
Leptin receptor variant associated with reduced satiety signaling and increased metabolic risk
The double arginine substitution at codon 223 creates two positively charged amino acids in the extracellular leptin-binding domain where the ancestral version has neutral glutamine residues. While the mutant receptor binds leptin with normal affinity, cellular studies suggest 21% reduced activation of STAT3 (the primary leptin signaling pathway). However, functional studies in mouse models found no effects on body weight or energy expenditure, suggesting the variant's effects may be subtle and context-dependent.
The most consistent finding is elevated circulating leptin in GG carriers, which likely reflects compensatory upregulation—your body makes more leptin trying to overcome reduced receptor responsiveness. This state of "leptin resistance" is a hallmark of obesity and metabolic dysfunction. Your genotype doesn't guarantee obesity (many GG individuals maintain healthy weight), but it may make you more susceptible in obesogenic environments characterized by excess calorie intake, sedentary behavior, and poor sleep.
Key References
Q223R predicts 4.5-5% variance in body fat and BMI in homozygous state
Functional study found no effects on leptin signaling or body composition in mouse model
2024 meta-analysis: GG vs AA shows OR=1.23 for obesity across 39 studies (6099 cases/6711 controls)
Meta-analysis confirms rs1137101 significantly associated with PCOS susceptibility in Asian populations