Research

rs1137101 — LEPR Q223R (Gln223Arg)

Common leptin receptor variant affecting satiety signaling and metabolic health

Moderate Risk Factor

Details

Gene
LEPR
Chromosome
1
Risk allele
G
Protein change
p.Gln223Arg
Consequence
Missense
Inheritance
Codominant
Clinical
Risk Factor
Evidence
Moderate
Chip coverage
v3 v4 v5

Population Frequency

AA
28%
AG
49%
GG
23%

Ancestry Frequencies

east_asian
87%
african
55%
south_asian
48%
european
45%
latino
44%

The Leptin Receptor Paradox — When Satiety Signals Misfire

Your leptin receptor (LEPR) gene codes for the protein that receives signals from leptin11 leptin
The "satiety hormone" produced by fat cells to signal energy sufficiency
, the hormone your fat cells release to tell your brain you've had enough to eat. The Q223R variant (rs1137101) is one of the most common and widely studied LEPR polymorphisms, present in the extracellular domain where leptin binds to its receptor. This non-conservative amino acid change22 non-conservative amino acid change
Glutamine (neutral) to Arginine (positively charged)
alters the charge and structure of the leptin-binding region, potentially affecting how efficiently your body responds to satiety signals.

The G allele (encoding Arginine at position 223) has been associated with obesity susceptibility33 associated with obesity susceptibility
Meta-analysis of 39 studies shows OR=1.23 for GG vs AA
across multiple populations, though the functional significance remains debated. Carriers of the G allele tend to have higher circulating leptin levels, which paradoxically may reflect leptin resistance44 leptin resistance
Elevated leptin fails to suppress appetite effectively
rather than enhanced signaling—a phenomenon central to the biology of obesity.

The Mechanism

The LEPR Q223R polymorphism results from an A-to-G transition (CAG → CGG) at codon 223, located in exon 6 of the leptin receptor gene on chromosome 1p31. This missense variant changes glutamine to arginine in the cytokine receptor homology 1 (CRH1) domain—specifically in the loop connecting the cytokine receptor and fibronectin type III domains where leptin physically binds55 leptin physically binds.

The functional consequences of this variant have been controversial. Early association studies66 Early association studies
2001 study found R223 homozygotes had 4.5-5% higher body fat percentage
linked the G allele to increased BMI and body fat percentage. However, rigorous functional testing in 200977 rigorous functional testing in 2009
Stratigopoulos et al. found no effects on weight, body composition, or STAT3 signaling
using mice with the humanized LEPR allele found no effects on body weight, composition, energy expenditure, or leptin-induced STAT3 signaling—casting doubt on direct biological causation.

More recent studies suggest subtle effects on receptor function88 subtle effects on receptor function
21% reduction in STAT3 activation in some cell culture studies
that may manifest only under specific conditions. The mutant receptor shows normal leptin binding kinetics but may affect receptor trafficking, surface expression, or downstream signaling efficiency. GG genotype carriers consistently show higher circulating leptin levels, which could indicate compensatory upregulation due to impaired leptin sensitivity99 impaired leptin sensitivity
Your body produces more leptin trying to overcome reduced receptor responsiveness
.

The Evidence

A comprehensive 2024 meta-analysis1010 comprehensive 2024 meta-analysis
39 studies with 6,099 obesity cases and 6,711 controls
analyzed rs1137101 across Asian and Caucasian populations. The findings showed significant associations across all genetic models: homozygous model (GG vs AA: OR=1.39, 95% CI=1.12-1.73, p=0.003), dominant model (AG/GG vs AA: OR=1.28, p=0.001), and allelic model (G vs A: OR=1.19, p=0.002). The association remained significant in both Asian and Caucasian subgroups, with no evidence of publication bias.

The allele frequency varies dramatically by ancestry1111 allele frequency varies dramatically by ancestry
East Asians: 87% G allele; Europeans: 45% G allele; Africans: 55% G allele
. This makes the G allele the major allele in East Asian populations but a balanced polymorphism in other ancestries—one reason why genetic associations may be stronger in Asian studies.

Beyond obesity, the variant has been linked to type 2 diabetes and metabolic syndrome1212 type 2 diabetes and metabolic syndrome
Associated with insulin resistance, dyslipidemia, and elevated fasting glucose
. A meta-analysis of PCOS studies1313 meta-analysis of PCOS studies
33 studies showing rs1137101 significantly associated with PCOS susceptibility
found the G allele increased risk of polycystic ovary syndrome, particularly in Asian populations, with the GG genotype correlating with higher leptin levels and worse metabolic profiles in PCOS patients.

Practical Actions

While the variant's direct functional impact remains uncertain, population-level associations suggest GG carriers may benefit from strategies that enhance leptin sensitivity1414 enhance leptin sensitivity
Interventions that restore your body's ability to respond to satiety signals
. High-protein diets appear particularly relevant: studies show protein intake enhances leptin's satiating effect1515 studies show protein intake enhances leptin's satiating effect
High-protein diets reduced spontaneous energy intake by 441 kcal/day
in the central nervous system and reduces spontaneous energy intake independent of leptin levels.

Exercise consistently improves leptin sensitivity1616 Exercise consistently improves leptin sensitivity
12+ weeks of moderate-intensity aerobic or resistance training, 3-4x/week
, particularly moderate-to-high intensity aerobic exercise and resistance training performed 3-4 times weekly for at least 12 weeks. The mechanism involves downregulating SOCS3 and PTP1B proteins that inhibit leptin signaling, while also increasing hypothalamic leptin receptor expression.

Time-restricted eating aligned with circadian rhythms1717 Time-restricted eating aligned with circadian rhythms
Confine eating to an 8-10 hour window during daylight hours
may help restore leptin rhythmicity—leptin normally peaks at night and is lowest in the morning, and this rhythm is disrupted in obesity. Eating late into the evening compounds leptin resistance by misaligning feeding with circadian leptin secretion patterns.

The Mediterranean dietary pattern1818 Mediterranean dietary pattern
Associated with lower leptin levels and higher adiponectin
, rich in fiber, omega-3 fatty acids, and anti-inflammatory compounds, has been associated with lower circulating leptin levels and reduced inflammation—both factors that may improve leptin signaling efficiency in genetically predisposed individuals.

Interactions

The LEPR Q223R variant is one of three common LEPR polymorphisms frequently studied together: K109R (rs1137100), Q223R (rs1137101), and K656N (rs1805094). These variants exist in linkage disequilibrium1919 linkage disequilibrium
They're inherited together more often than expected by chance
(D'=1 but r²<1), meaning they often occur together but aren't perfectly correlated. Some studies suggest compound effects when multiple variants are present, though Q223R appears to have the strongest independent association with obesity.

The leptin receptor functions within a broader neuroendocrine signaling network. Variants in the LEP gene2020 LEP gene
Encodes leptin itself; rs7799039 affects leptin levels
(encoding leptin itself, particularly rs7799039) may interact with LEPR variants to determine overall leptin axis function. Additionally, leptin signaling cross-talks with circadian clock genes2121 cross-talks with circadian clock genes
CLOCK-BMAL1 regulate PPAR expression which affects leptin production
like CLOCK and BMAL1, creating a bidirectional relationship where leptin influences circadian rhythms and circadian disruption worsens leptin resistance.

The variant's effects may be most pronounced in the context of obesogenic environments2222 obesogenic environments
High-calorie, processed food diets and sedentary behavior amplify genetic susceptibility
—high-calorie diets, sedentary behavior, and poor sleep. Environmental factors likely obscure the variant's subtle functional effects in free-living populations, explaining why controlled functional studies show minimal impact while epidemiological studies consistently find associations.

Nutrient Interactions

protein altered_metabolism
dietary_fat altered_metabolism

Genotype Interpretations

What each possible genotype means for this variant:

AA “Normal Leptin Receptor” Normal

Standard leptin receptor function with typical satiety signaling

You have two copies of the A allele (glutamine at position 223), which is the ancestral form of the leptin receptor. This is the most common genotype in European (31%), Latino (33%), and South Asian (28%) populations. Your leptin receptor has the standard amino acid sequence in the leptin-binding domain, supporting typical satiety signaling and metabolic regulation. Research shows this genotype is associated with lower circulating leptin levels and better leptin sensitivity compared to G allele carriers.

AG “Intermediate Leptin Function” Intermediate Caution

Moderately altered leptin receptor with subtle effects on satiety

The heterozygous state means about half your leptin receptors have the Q223 form and half have R223. While functional studies in controlled settings haven't consistently demonstrated impaired signaling, population studies show AG carriers have intermediate characteristics for BMI, body fat percentage, and circulating leptin levels. The effect size is modest—your genetics explain perhaps 2-3% of variance in body weight and composition. Environmental factors (diet, exercise, sleep) have far greater influence on your metabolic outcomes than this single variant.

GG “Altered Leptin Receptor” Reduced Warning

Leptin receptor variant associated with reduced satiety signaling and increased metabolic risk

The double arginine substitution at codon 223 creates two positively charged amino acids in the extracellular leptin-binding domain where the ancestral version has neutral glutamine residues. While the mutant receptor binds leptin with normal affinity, cellular studies suggest 21% reduced activation of STAT3 (the primary leptin signaling pathway). However, functional studies in mouse models found no effects on body weight or energy expenditure, suggesting the variant's effects may be subtle and context-dependent.

The most consistent finding is elevated circulating leptin in GG carriers, which likely reflects compensatory upregulation—your body makes more leptin trying to overcome reduced receptor responsiveness. This state of "leptin resistance" is a hallmark of obesity and metabolic dysfunction. Your genotype doesn't guarantee obesity (many GG individuals maintain healthy weight), but it may make you more susceptible in obesogenic environments characterized by excess calorie intake, sedentary behavior, and poor sleep.

Key References

PMID: 11549688

Q223R predicts 4.5-5% variance in body fat and BMI in homozygous state

PMID: 18997673

Functional study found no effects on leptin signaling or body composition in mouse model

PMID: 38625203

2024 meta-analysis: GG vs AA shows OR=1.23 for obesity across 39 studies (6099 cases/6711 controls)

PMID: 31412346

Meta-analysis confirms rs1137101 significantly associated with PCOS susceptibility in Asian populations